miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00244;mir-26;ABRQ01331574.1/517-587 9813:Procavia capensis
(cape rock hyrax)
Length = 71
Score = 137 bits (69), Expect = 2e-32
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 4 ggacccagttcaagtaattcaggataggttgtgtgctgtccagcctgttctccattactt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggacccagttcaagtaattcaggataggttgtgtgctgtccagcctgttctccattactt 60
Query: 64 ggctcgggg 72
|||||||||
Sbjct: 61 ggctcgggg 69
>RF00244;mir-26;AAFR03041753.1/18045-17975 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 71
Score = 65.9 bits (33), Expect = 7e-11
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 12 ttcaagtaattcaggataggttgtgtgctgtccagcctgttctccattacttggctcggg 71
|||||||||| ||||||||| ||| | || | |||||||||||||||||||||| |||||
Sbjct: 9 ttcaagtaatccaggataggctgttttctcttcagcctgttctccattacttggttcggg 68
Query: 72 g 72
|
Sbjct: 69 g 69
>RF00244;mir-26;AAPN01398538.1/2438-2512 9258:Ornithorhynchus
anatinus (platypus)
Length = 75
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 11 gttcaagtaattcaggataggttgtgtgc 39
||||||||||| ||||||||| |||||||
Sbjct: 8 gttcaagtaatccaggataggctgtgtgc 36
