miRNEST 2.0, an integrative microRNA resource :: BLAST
>27673_mml-mir-27a:mirbase
Length = 78
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtgg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
Query: 61 ctaagttccgccccccag 78
||||||||||||||||||
Sbjct: 61 ctaagttccgccccccag 78
>28273_ggo-mir-27a:mirbase
Length = 78
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtgg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
Query: 61 ctaagttccgccccccag 78
||||||||||||||||||
Sbjct: 61 ctaagttccgccccccag 78
>28383_hsa-mir-27a:mirbase
Length = 78
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtgg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
Query: 61 ctaagttccgccccccag 78
||||||||||||||||||
Sbjct: 61 ctaagttccgccccccag 78
>30060_ppa-mir-27a:mirbase
Length = 78
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtgg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
Query: 61 ctaagttccgccccccag 78
||||||||||||||||||
Sbjct: 61 ctaagttccgccccccag 78
>30169_ptr-mir-27a:mirbase
Length = 78
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtgg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
Query: 61 ctaagttccgccccccag 78
||||||||||||||||||
Sbjct: 61 ctaagttccgccccccag 78
>28187_mne-mir-27a:mirbase
Length = 79
Score = 143 bits (72), Expect = 2e-35
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtgg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagtcgtgttcacagtgg 60
Query: 61 ctaagttccgcccccc 76
||||||||||||||||
Sbjct: 61 ctaagttccgcccccc 76
>31404_lca-mir-27a:mirbase
Length = 78
Score = 127 bits (64), Expect = 1e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtgg 60
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaaatcatgttcacagtgg 60
Query: 61 ctaagttccgcccccc 76
||||||||||||||||
Sbjct: 61 ctaagttccgcccccc 76
>27491_age-mir-27a:mirbase
Length = 78
Score = 123 bits (62), Expect = 2e-29
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtgg 60
||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggttcactccaagtcatgttcacagtgg 60
Query: 61 ctaagttccgccccccag 78
||||||||||||||||||
Sbjct: 61 ctaagttccgccccccag 78
>27599_sla-mir-27a:mirbase
Length = 78
Score = 123 bits (62), Expect = 2e-29
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtgg 60
||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||
Sbjct: 1 ctgaggagcagggcttagctgcttgtgagcagggttcactccaagtcatgttcacagtgg 60
Query: 61 ctaagttccgccccccag 78
||||||||||||||||||
Sbjct: 61 ctaagttccgccccccag 78
>26966_eca-mir-27a:mirbase
Length = 77
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtggctaa 64
|||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 5 ggagcagggcttagctgcttgtgagcagggtccacaccgagtcatgttcacagtggctaa 64
Query: 65 gttccgcccccc 76
||||||||||||
Sbjct: 65 gttccgcccccc 76
>31797_mmu-mir-27a:mirbase
Length = 87
Score = 111 bits (56), Expect = 7e-26
Identities = 72/76 (94%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 ctgaggagcagggcttagctgcttgtgagcagggtccaca-ccaagttgtgttcacagtg 59
||||||||||||||||||||||||||||||| |||||||| | |||| ||||||||||||
Sbjct: 5 ctgaggagcagggcttagctgcttgtgagcaaggtccacagcaaagtcgtgttcacagtg 64
Query: 60 gctaagttccgccccc 75
||||||||||||||||
Sbjct: 65 gctaagttccgccccc 80
>33931_ssc-mir-27a:mirbase
Length = 82
Score = 109 bits (55), Expect = 3e-25
Identities = 68/71 (95%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtggctaa 64
||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||
Sbjct: 9 ggagcagggcttagctgcttgtgagcagg-tccacagcaagtcgtgttcacagtggctaa 67
Query: 65 gttccgccccc 75
|||||||||||
Sbjct: 68 gttccgccccc 78
>26645_cfa-mir-27a:mirbase
Length = 60
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 11 gggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtggctaagttccg 70
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gggcttagctgcttgtgagcagagtccacaccaagtcgtgttcacagtggctaagttccg 60
>33154_bta-mir-27a:mirbase
Length = 78
Score = 101 bits (51), Expect = 7e-23
Identities = 67/71 (94%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtggctaa 64
||||||||||||||||||||||||||||| |||||| ||| | |||||||||||||||||
Sbjct: 9 ggagcagggcttagctgcttgtgagcagg-tccacatcaaatcgtgttcacagtggctaa 67
Query: 65 gttccgccccc 75
|||||||||||
Sbjct: 68 gttccgccccc 78
>33155_bta-mir-27a:mirbase
Length = 78
Score = 101 bits (51), Expect = 7e-23
Identities = 67/71 (94%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaagttgtgttcacagtggctaa 64
||||||||||||||||||||||||||||| |||||| ||| | |||||||||||||||||
Sbjct: 9 ggagcagggcttagctgcttgtgagcagg-tccacatcaaatcgtgttcacagtggctaa 67
Query: 65 gttccgccccc 75
|||||||||||
Sbjct: 68 gttccgccccc 78
>32680_rno-mir-27a:mirbase
Length = 87
Score = 95.6 bits (48), Expect = 4e-21
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 5 ggagcagggcttagctgcttgtgagcagggtccacaccaa-gttgtgttcacagtggcta 63
||||||||||||||||||||||||||| |||| ||| ||| || ||||||||||||||||
Sbjct: 9 ggagcagggcttagctgcttgtgagcaaggtctacagcaaagtcgtgttcacagtggcta 68
Query: 64 agttccgccccc 75
||||||||||||
Sbjct: 69 agttccgccccc 80
>27351_mdo-mir-27a:mirbase
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 2 tgaggagcagggcttagctgc-ttgtgagcagggtccacaccaagttgtgttcacagtgg 60
||||||||||| ||||||||| |||||| ||| ||| || || |||||||||||||||
Sbjct: 6 tgaggagcaggacttagctgccttgtgaacagagtcagcatcatattgtgttcacagtgg 65
Query: 61 ctaagttccgcccccc 76
||||||||||| ||||
Sbjct: 66 ctaagttccgctcccc 81
>31444_oan-mir-27a:mirbase
Length = 85
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 48 gtgttcacagtggctaagttccgcccc 74
|||||||||||||||||||||||||||
Sbjct: 50 gtgttcacagtggctaagttccgcccc 76
>25723_xtr-mir-27a:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttccgc 71
|||||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttccgc 71
>34237_dre-mir-27a:mirbase
Length = 131
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttccgc 71
|||||||||||||||||||||||
Sbjct: 77 tgttcacagtggctaagttccgc 99
>25725_xtr-mir-27c-1:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttccgcccc 74
||||||||||||||||||||| ||||
Sbjct: 52 tgttcacagtggctaagttccacccc 77
>25726_xtr-mir-27c-2:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttccgcccc 74
||||||||||||||||||||| ||||
Sbjct: 52 tgttcacagtggctaagttccacccc 77
>25449_pma-mir-27a:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttcc 69
|||||||||||||||||||||
Sbjct: 48 tgttcacagtggctaagttcc 68
>25450_pma-mir-27b:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 gtgttcacagtggctaagttc 68
|||||||||||||||||||||
Sbjct: 46 gtgttcacagtggctaagttc 66
>25724_xtr-mir-27b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>25910_gga-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>26416_tgu-mir-27:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>26646_cfa-mir-27b:mirbase
Length = 63
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 41 tgttcacagtggctaagttc 60
>26967_eca-mir-27b:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>27352_mdo-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>27674_mml-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>28384_hsa-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>30170_ptr-mir-27b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttc 77
>30775_ppy-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>31445_oan-mir-27b:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 70 tgttcacagtggctaagttc 89
>31798_mmu-mir-27b:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>32681_rno-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>33156_bta-mir-27b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 59 tgttcacagtggctaagttc 78
>33932_ssc-mir-27b:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 50 tgttcacagtggctaagttc 69
>34238_dre-mir-27b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 55 tgttcacagtggctaagttc 74
>34240_dre-mir-27d:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 55 tgttcacagtggctaagttc 74
>34241_dre-mir-27e:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 63 tgttcacagtggctaagttc 82
>34566_fru-mir-27b:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>34568_fru-mir-27e:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttc 77
>34713_tni-mir-27b:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttc 66
>34715_tni-mir-27e:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tgttcacagtggctaagttc 68
||||||||||||||||||||
Sbjct: 58 tgttcacagtggctaagttc 77
