miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 234 bits (118), Expect = 1e-62
Identities = 118/118 (100%)
Strand = Plus / Minus
Query: 1 gagtcgagaattccaaagggattgcactgatcttgcatatgcatcgatccatccatccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gagtcgagaattccaaagggattgcactgatcttgcatatgcatcgatccatccatccgt 90
Query: 61 tgattcatgcttggatgcagctgatgagatcaatgcgatccctttggagtcctccact 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 tgattcatgcttggatgcagctgatgagatcaatgcgatccctttggagtcctccact 32
>41999_osa-MIR393b:mirbase
Length = 132
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 87 agatcaatgcgatccctttggagtcctccact 118
||||||||||||||||||||||||||||||||
Sbjct: 48 agatcaatgcgatccctttggagtcctccact 17
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 aattccaaagggattgcactgatc 32
||||||||||||||||||||||||
Sbjct: 124 aattccaaagggattgcactgatc 101
>41998_osa-MIR393b:mirbase
Length = 132
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 87 agatcaatgcgatccctttggagtcctccact 118
||||||||||||||||||||||||||||||||
Sbjct: 48 agatcaatgcgatccctttggagtcctccact 17
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 9 aattccaaagggattgcactgatc 32
||||||||||||||||||||||||
Sbjct: 124 aattccaaagggattgcactgatc 101
>42786_zma-MIR393a:mirbase
Length = 126
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 87 agatcaatgcgatccctttggagtcctccac 117
|||||||||||||||||||||||||||||||
Sbjct: 42 agatcaatgcgatccctttggagtcctccac 12
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 9 aattccaaagggattgcactgatcttg 35
|||||||||||||||||||||||||||
Sbjct: 110 aattccaaagggattgcactgatcttg 84
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 11 ttccaaagggattgcactgatcttg 35
|||||||||||||||||||||||||
Sbjct: 84 ttccaaagggattgcactgatcttg 60
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 85 tgagatcaatgcgatccctttgga 108
||||||||||||||||||||||||
Sbjct: 24 tgagatcaatgcgatccctttgga 1
>42788_zma-MIR393c:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 87 agatcaatgcgatccctttggag 109
|||||||||||||||||||||||
Sbjct: 23 agatcaatgcgatccctttggag 1
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 aattccaaagggattgcactga 30
||||||||||||||||||||||
Sbjct: 97 aattccaaagggattgcactga 76
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 87 agatcaatgcgatccctttggag 109
|||||||||||||||||||||||
Sbjct: 42 agatcaatgcgatccctttggag 20
>41054_ghr-MIR393:mirbase
Length = 139
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 87 agatcaatgcgatccctttggag 109
|||||||||||||||||||||||
Sbjct: 32 agatcaatgcgatccctttggag 10
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 agatcaatgcgatccctttgga 108
||||||||||||||||||||||
Sbjct: 32 agatcaatgcgatccctttgga 11
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 agatcaatgcgatccctttgga 108
||||||||||||||||||||||
Sbjct: 32 agatcaatgcgatccctttgga 11
>40373_rco-MIR393:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 agatcaatgcgatccctttgga 108
||||||||||||||||||||||
Sbjct: 27 agatcaatgcgatccctttgga 6
>42787_zma-MIR393b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 22 gatcaatgcgatccctttgga 2
>42566_sbi-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 40 gatcaatgcgatccctttgga 20
>41997_osa-MIR393:mirbase
Length = 115
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 31 gatcaatgcgatccctttgga 11
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 56 gatcaatgcgatccctttgga 36
>41642_vvi-MIR393b:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 31 gatcaatgcgatccctttgga 11
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 31 gatcaatgcgatccctttgga 11
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 31 gatcaatgcgatccctttgga 11
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 31 gatcaatgcgatccctttgga 11
>41238_csi-MIR393:mirbase
Length = 145
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 41 gatcaatgcgatccctttgga 21
>41132_tcc-MIR393a:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 41 gatcaatgcgatccctttgga 21
>40707_mtr-MIR393b:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 26 gatcaatgcgatccctttgga 6
>40706_mtr-MIR393:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 41 gatcaatgcgatccctttgga 21
>40470_gma-MIR393:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 31 gatcaatgcgatccctttgga 11
>40295_bna-MIR393:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 21 gatcaatgcgatccctttgga 1
>40076_ath-MIR393b:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 31 gatcaatgcgatccctttgga 11
>40075_ath-MIR393a:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 31 gatcaatgcgatccctttgga 11
>39866_aly-MIR393b:mirbase
Length = 169
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 38 gatcaatgcgatccctttgga 18
>39865_aly-MIR393a:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 88 gatcaatgcgatccctttgga 108
|||||||||||||||||||||
Sbjct: 38 gatcaatgcgatccctttgga 18