miRNEST 2.0, an integrative microRNA resource :: BLAST
>27500_age-mir-98:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
Query: 61 tatacaacttactactttcc 80
||||||||||||||||||||
Sbjct: 61 tatacaacttactactttcc 80
>27701_mml-mir-98:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
Query: 61 tatacaacttactactttcc 80
||||||||||||||||||||
Sbjct: 61 tatacaacttactactttcc 80
>28291_ggo-mir-98:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
Query: 61 tatacaacttactactttcc 80
||||||||||||||||||||
Sbjct: 61 tatacaacttactactttcc 80
>28411_hsa-mir-98:mirbase
Length = 119
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 80
Query: 61 tatacaacttactactttcc 80
||||||||||||||||||||
Sbjct: 81 tatacaacttactactttcc 100
>30078_ppa-mir-98:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
Query: 61 tatacaacttactactttcc 80
||||||||||||||||||||
Sbjct: 61 tatacaacttactactttcc 80
>30195_ptr-mir-98:mirbase
Length = 119
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 80
Query: 61 tatacaacttactactttcc 80
||||||||||||||||||||
Sbjct: 81 tatacaacttactactttcc 100
>26994_eca-mir-98:mirbase
Length = 119
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 21 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataac 80
Query: 61 tatacaacttactactttcc 80
||||||||||||||||||||
Sbjct: 81 tatacaacttactactttcc 100
>26672_cfa-mir-98:mirbase
Length = 80
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 2 tgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataact 61
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
Query: 62 atacaacttactactttcc 80
|||||||||||||||||||
Sbjct: 61 atacaacttactactttcc 79
>33955_ssc-mir-98:mirbase
Length = 80
Score = 147 bits (74), Expect = 1e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataac 62
Query: 61 tatacaacttactacttt 78
||||||||||||||||||
Sbjct: 63 tatacaacttactacttt 80
>32705_rno-mir-98:mirbase
Length = 108
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 15 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccaataagaagataac 74
Query: 61 tatacaacttactactttcc 80
||||||||||||||||||||
Sbjct: 75 tatacaacttactactttcc 94
>33184_bta-mir-98:mirbase
Length = 119
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 21 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccaatttgaagataac 80
Query: 61 tatacaacttactactttcc 80
||||||||||||||||||||
Sbjct: 81 tatacaacttactactttcc 100
>31824_mmu-mir-98:mirbase
Length = 108
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
|||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||
Sbjct: 15 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccagtaagaagataac 74
Query: 61 tatacaacttactactttcc 80
||||||||||||||||||||
Sbjct: 75 tatacaacttactactttcc 94
>31469_oan-mir-98:mirbase
Length = 149
Score = 83.8 bits (42), Expect = 2e-17
Identities = 73/81 (90%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 2 tgaggtagtaagttgtattgttgtggggtagggatat--taggccccaattagaagataa 59
||||||||||||||||||||||||||||||||||| | | ||||||||||| |||||
Sbjct: 31 tgaggtagtaagttgtattgttgtggggtagggatttcttttgccccaattagc-gataa 89
Query: 60 ctatacaacttactactttcc 80
|||||||| ||||||||||||
Sbjct: 90 ctatacaatttactactttcc 110
>25753_xtr-mir-98:mirbase
Length = 108
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 2 tgaggtagtaagttgtattgttgtgggg 29
||||||||||||||||||||||||||||
Sbjct: 17 tgaggtagtaagttgtattgttgtgggg 44
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 47 aattagaagataactatacaacttact 73
|||||| ||||||||||||| ||||||
Sbjct: 60 aattaggagataactatacagcttact 86
>27321_mdo-let-7b:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 9e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 42 gccccaattagaagataactatacaacttact 73
|||||||| |||||||||||||||||| ||||
Sbjct: 46 gccccaatcagaagataactatacaacctact 77
>31410_oan-let-7b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 42 gccccaattagaagataactataca 66
|||||||| ||||||||||||||||
Sbjct: 43 gccccaatcagaagataactataca 67
>34181_dre-let-7h:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgt 25
||||||||||||||||| |||||||
Sbjct: 18 gtgaggtagtaagttgtgttgttgt 42
>34532_fru-let-7h:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgt 25
||||||||||||||||| |||||||
Sbjct: 5 gtgaggtagtaagttgtgttgttgt 29
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 agataactatacaacttact 73
||||||||||||||||||||
Sbjct: 57 agataactatacaacttact 76
>34680_tni-let-7h:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgt 25
||||||||||||||||| |||||||
Sbjct: 17 gtgaggtagtaagttgtgttgttgt 41
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 agataactatacaacttact 73
||||||||||||||||||||
Sbjct: 72 agataactatacaacttact 91
>25871_gga-let-7b:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 42 gccccaattagaagataactatacaacttact 73
|||||||| || ||||||||||||||| ||||
Sbjct: 44 gccccaatcaggagataactatacaacctact 75
>26379_tgu-let-7b:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 42 gccccaattagaagataactatacaacttact 73
|||||||| || ||||||||||||||| ||||
Sbjct: 49 gccccaatcaggagataactatacaacctact 80
>26934_eca-let-7f:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtag 32
||||||||||| |||||| ||||||||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtag 37
>27323_mdo-let-7f-1:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtag 32
||||||||||| |||||| ||||||||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtag 37
>27636_mml-let-7f-1:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtag 32
||||||||||| |||||| ||||||||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtag 37
>28346_hsa-let-7f-1:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtag 32
||||||||||| |||||| ||||||||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtag 37
>30133_ptr-let-7f-1:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtag 32
||||||||||| |||||| ||||||||||||
Sbjct: 5 gtgaggtagtagattgtatagttgtggggtag 36
>30738_ppy-let-7f-1:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtag 32
||||||||||| |||||| ||||||||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtag 37
>31759_mmu-let-7f-1:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtag 32
||||||||||| |||||| ||||||||||||
Sbjct: 7 gtgaggtagtagattgtatagttgtggggtag 38
>32645_rno-let-7f-1:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtag 32
||||||||||| |||||| ||||||||||||
Sbjct: 7 gtgaggtagtagattgtatagttgtggggtag 38
>33101_rno-mir-3596d:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1 gtgaggtagtaagttgtattgttgtggggtag 32
||||||||||| |||||| ||||||||||||
Sbjct: 87 gtgaggtagtagattgtatagttgtggggtag 56
>33115_bta-let-7f-1:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gtgaggtagtaagttgtattgttgtggggtag 32
||||||||||| |||||| ||||||||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtag 37
>34167_dre-let-7a-3:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 agataactatacaacttact 73
||||||||||||||||||||
Sbjct: 62 agataactatacaacttact 81
>34526_fru-let-7a-2:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 agataactatacaacttact 73
||||||||||||||||||||
Sbjct: 48 agataactatacaacttact 67
>34674_tni-let-7a-2:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 agataactatacaacttact 73
||||||||||||||||||||
Sbjct: 56 agataactatacaacttact 75
>26610_cfa-let-7f:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 9e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 2 tgaggtagtaagttgtattgttgtggggtag 32
|||||||||| |||||| ||||||||||||
Sbjct: 1 tgaggtagtagattgtatagttgtggggtag 31
>27632_mml-let-7b:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 51 agaagataactatacaacttact 73
|||||||||||||||||| ||||
Sbjct: 51 agaagataactatacaacctact 73
>30129_ptr-let-7b:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 51 agaagataactatacaacttact 73
|||||||||||||||||| ||||
Sbjct: 50 agaagataactatacaacctact 72
>30734_ppy-let-7b:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 51 agaagataactatacaacttact 73
|||||||||||||||||| ||||
Sbjct: 51 agaagataactatacaacctact 73
