miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30100_ppa-mir-147:mirbase
Length = 72
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 aatctaaagaaaacatttctgcacacacaccagactatggaagccagtgtgtggaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatctaaagaaaacatttctgcacacacaccagactatggaagccagtgtgtggaaatgc 60
Query: 61 ttctgctagatt 72
||||||||||||
Sbjct: 61 ttctgctagatt 72
>30240_ptr-mir-147a:mirbase
Length = 72
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 aatctaaagaaaacatttctgcacacacaccagactatggaagccagtgtgtggaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatctaaagaaaacatttctgcacacacaccagactatggaagccagtgtgtggaaatgc 60
Query: 61 ttctgctagatt 72
||||||||||||
Sbjct: 61 ttctgctagatt 72
>28469_hsa-mir-147:mirbase
Length = 72
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 aatctaaagaaaacatttctgcacacacaccagactatggaagccagtgtgtggaaatgc 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatctaaagacaacatttctgcacacacaccagactatggaagccagtgtgtggaaatgc 60
Query: 61 ttctgctagatt 72
||||||||||||
Sbjct: 61 ttctgctagatt 72
>27754_mml-mir-147a:mirbase
Length = 72
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 aatctaaagaaaacatttctgcacacacaccagactatggaagccagtgtgtggaaatgc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aatctaaagaaaacatttctgcacacacaccagactattgaagccagtgtgtggaaatgc 60
Query: 61 ttctgcta 68
||||||||
Sbjct: 61 ttctgcta 68
>28217_mne-mir-147:mirbase
Length = 72
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 aatctaaagaaaacatttctgcacacacaccagactatggaagccagtgtgtggaaatgc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aatctaaagaaaacatttctgcacacacaccagactattgaagccagtgtgtggaaatgc 60
Query: 61 ttctgcta 68
||||||||
Sbjct: 61 ttctgcta 68
>27619_sla-mir-147:mirbase
Length = 72
Score = 123 bits (62), Expect = 2e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1 aatctaaagaaaacatttctgcacacacaccagactatggaagccagtgtgtggaaatgc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aatctaaagaaaacatttctgcacacacaccagactattgaagccagtgtgtggaaatgc 60
Query: 61 ttctgc 66
||||||
Sbjct: 61 ttctgc 66
>31881_mmu-mir-147:mirbase
Length = 79
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 43 gccagtgtgtggaaatgcttctgcta 68
||||||||| ||||||||||||||||
Sbjct: 44 gccagtgtgcggaaatgcttctgcta 69
>32754_rno-mir-147:mirbase
Length = 79
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 43 gccagtgtgtggaaatgcttctgcta 68
||||||||| ||||||||||||||||
Sbjct: 44 gccagtgtgcggaaatgcttctgcta 69
>26722_cfa-mir-147:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 44 ccagtgtgtggaaatgcttctgcta 68
|||||||| ||||||||||||||||
Sbjct: 50 ccagtgtgcggaaatgcttctgcta 74
>28470_hsa-mir-147b:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 44 ccagtgtgtggaaatgcttctgcta 68
|||||||| ||||||||||||||||
Sbjct: 46 ccagtgtgcggaaatgcttctgcta 70
>30241_ptr-mir-147b:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 44 ccagtgtgtggaaatgcttctgcta 68
|||||||| ||||||||||||||||
Sbjct: 45 ccagtgtgcggaaatgcttctgcta 69
>30854_ppy-mir-147b:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 44 ccagtgtgtggaaatgcttctgcta 68
|||||||| ||||||||||||||||
Sbjct: 46 ccagtgtgcggaaatgcttctgcta 70
>33234_bta-mir-147:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 44 ccagtgtgtggaaatgcttctgcta 68
|||||||| ||||||||||||||||
Sbjct: 46 ccagtgtgcggaaatgcttctgcta 70
>25969_gga-mir-147-1:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 45 cagtgtgtggaaatgcttctgcta 68
||||||| ||||||||||||||||
Sbjct: 43 cagtgtgcggaaatgcttctgcta 66
>25970_gga-mir-147-2:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 45 cagtgtgtggaaatgcttctgcta 68
||||||| ||||||||||||||||
Sbjct: 43 cagtgtgcggaaatgcttctgcta 66
>26478_tgu-mir-147:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 45 cagtgtgtggaaatgcttctgcta 68
||||||| ||||||||||||||||
Sbjct: 39 cagtgtgcggaaatgcttctgcta 62
