miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>27758_mml-mir-149:mirbase
          Length = 89

 Score =  153 bits (77), Expect = 2e-38
 Identities = 83/85 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  gccggcgcccgagctctggctccgtgtcttcactcccgtgtttgtccaaggagggaggga 60
          |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1  gccggcgcccaagctctggctccgtgtcttcactcccgtgtttgtccgaggagggaggga 60

                                   
Query: 61 gggacgggggctgtgctggggcagc 85
          |||||||||||||||||||||||||
Sbjct: 61 gggacgggggctgtgctggggcagc 85




>28473_hsa-mir-149:mirbase
          Length = 89

 Score =  153 bits (77), Expect = 2e-38
 Identities = 83/85 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  gccggcgcccgagctctggctccgtgtcttcactcccgtgtttgtccaaggagggaggga 60
          |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 1  gccggcgcccgagctctggctccgtgtcttcactcccgtgcttgtccgaggagggaggga 60

                                   
Query: 61 gggacgggggctgtgctggggcagc 85
          |||||||||||||||||||||||||
Sbjct: 61 gggacgggggctgtgctggggcagc 85




>30244_ptr-mir-149:mirbase
          Length = 81

 Score =  145 bits (73), Expect = 6e-36
 Identities = 79/81 (97%)
 Strand = Plus / Plus

                                                                      
Query: 2  ccggcgcccgagctctggctccgtgtcttcactcccgtgtttgtccaaggagggagggag 61
          ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 1  ccggcgcccgagctctggctccgtgtcttcactcccgtgcttgtccgaggagggagggag 60

                               
Query: 62 ggacgggggctgtgctggggc 82
          |||||||||||||||||||||
Sbjct: 61 ggacgggggctgtgctggggc 81




>26725_cfa-mir-149:mirbase
          Length = 83

 Score =  131 bits (66), Expect = 9e-32
 Identities = 81/85 (95%), Gaps = 2/85 (2%)
 Strand = Plus / Plus

                                                                      
Query: 1  gccggcgcccgagctctggctccgtgtcttcactcccgtgtttgtccaaggagggaggga 60
          ||||||||||| |||||||||||||||||||||||||||||  |||| ||||||||||||
Sbjct: 1  gccggcgcccgggctctggctccgtgtcttcactcccgtgt--gtccgaggagggaggga 58

                                   
Query: 61 gggacgggggctgtgctggggcagc 85
          |||||||||||||||||||||||||
Sbjct: 59 gggacgggggctgtgctggggcagc 83




>27053_eca-mir-149:mirbase
          Length = 89

 Score =  131 bits (66), Expect = 9e-32
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  gccggcgcccgagctctggctccgtgtcttcactcccgtgtttgtccaaggagggaggga 60
          ||||||||||  ||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 1  gccggcgcccaggctctggctccgtgtcttcactcccgtgtgtgtccgaggagggaggga 60

                                
Query: 61 gggacgggggctgtgctggggc 82
          ||||||||||||||||||||||
Sbjct: 61 gggacgggggctgtgctggggc 82




>34000_ssc-mir-149:mirbase
          Length = 76

 Score =  123 bits (62), Expect = 2e-29
 Identities = 68/70 (97%)
 Strand = Plus / Plus

                                                                      
Query: 13 gctctggctccgtgtcttcactcccgtgtttgtccaaggagggagggagggacgggggct 72
          ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 7  gctctggctccgtgtcttcactcccgtgtgtgtccgaggagggagggagggacgggggct 66

                    
Query: 73 gtgctggggc 82
          ||||||||||
Sbjct: 67 gtgctggggc 76




>31884_mmu-mir-149:mirbase
          Length = 66

 Score =  113 bits (57), Expect = 2e-26
 Identities = 63/65 (96%)
 Strand = Plus / Plus

                                                                      
Query: 13 gctctggctccgtgtcttcactcccgtgtttgtccaaggagggagggagggacgggggct 72
          ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 2  gctctggctccgtgtcttcactcccgtgtttgtccgaggagggagggagggacgggggcg 61

               
Query: 73 gtgct 77
          |||||
Sbjct: 62 gtgct 66