miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00771;mir-185;ABRQ01651281.1/406-486 9813:Procavia capensis
          (cape rock hyrax)
          Length = 81

 Score =  137 bits (69), Expect = 2e-32
 Identities = 78/81 (96%)
 Strand = Plus / Plus

                                                                      
Query: 2  gggggcgagggattggagagaaaggcagttcctgatggtcccctccccaggggctggctt 61
          ||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1  gggggtgagggactggagagaaaggcagttcctgatggtcacctccccaggggctggctt 60

                               
Query: 62 tcctctggtccttccctccca 82
          |||||||||||||||||||||
Sbjct: 61 tcctctggtccttccctccca 81




>RF00771;mir-185;ABRP01127770.1/4358-4280 132908:Pteropus vampyrus
          (large flying fox)
          Length = 79

 Score = 60.0 bits (30), Expect = 4e-09
 Identities = 43/46 (93%), Gaps = 1/46 (2%)
 Strand = Plus / Plus

                                                        
Query: 8  gagggattggagagaaaggcagttcctgatggtcccctccccaggg 53
          ||||||||| |||||||| ||||||||||||||||||| |||||||
Sbjct: 9  gagggattgaagagaaag-cagttcctgatggtcccctgcccaggg 53