miRNEST 2.0, an integrative microRNA resource :: BLAST
>27910_mml-mir-450a-2:mirbase
Length = 100
Score = 182 bits (92), Expect = 3e-47
Identities = 98/100 (98%)
Strand = Plus / Plus
Query: 1 ccaaagaaagatgctaaactatttttgcgatgtgttcctaatacgtaatataaatgtatt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 ccaaagaaagatgctaaactatttttgcgatgtgttcctaatatgtaatataaatgtatt 60
Query: 61 ggggacattttgcattcatagttttgtatcaatgatatgg 100
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 ggggacattttgcattcatagttttgtatcaataatatgg 100
>28658_hsa-mir-450a-2:mirbase
Length = 100
Score = 182 bits (92), Expect = 3e-47
Identities = 98/100 (98%)
Strand = Plus / Plus
Query: 1 ccaaagaaagatgctaaactatttttgcgatgtgttcctaatacgtaatataaatgtatt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 ccaaagaaagatgctaaactatttttgcgatgtgttcctaatatgtaatataaatgtatt 60
Query: 61 ggggacattttgcattcatagttttgtatcaatgatatgg 100
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 ggggacattttgcattcatagttttgtatcaataatatgg 100
>30380_ptr-mir-450a-2:mirbase
Length = 99
Score = 180 bits (91), Expect = 1e-46
Identities = 97/99 (97%)
Strand = Plus / Plus
Query: 1 ccaaagaaagatgctaaactatttttgcgatgtgttcctaatacgtaatataaatgtatt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 ccaaagaaagatgctaaactatttttgcgatgtgttcctaatatgtaatataaatgtatt 60
Query: 61 ggggacattttgcattcatagttttgtatcaatgatatg 99
||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 ggggacattttgcattcatagttttgtatcaataatatg 99
>27186_eca-mir-451a:mirbase
Length = 89
Score = 159 bits (80), Expect = 5e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 6 gaaagatgctaaactatttttgcgatgtgttcctaatacgtaatataaatgtattgggga 65
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gaaagatgctcaactatttttgcgatgtgttcctaatacgtaatataaatgtattgggaa 60
Query: 66 cattttgcattcatagttttgtatcaat 93
||||||||||||||||||||||||||||
Sbjct: 61 cattttgcattcatagttttgtatcaat 88
>33381_bta-mir-450:mirbase
Length = 92
Score = 159 bits (80), Expect = 5e-40
Identities = 89/92 (96%)
Strand = Plus / Plus
Query: 2 caaagaaagatgctaaactatttttgcgatgtgttcctaatacgtaatataaatgtattg 61
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 1 caaagaaagatgctaaactatttttgcgatgtgttcctaatatgtaatctaaatgtattg 60
Query: 62 gggacattttgcattcatagttttgtatcaat 93
|| |||||||||||||||||||||||||||||
Sbjct: 61 ggaacattttgcattcatagttttgtatcaat 92
>34100_ssc-mir-450c:mirbase
Length = 81
Score = 115 bits (58), Expect = 6e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 14 ctaaactatttttgcgatgtgttcctaatacgtaatataaatgtattggggacattttgc 73
|||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||
Sbjct: 5 ctaaactatttttgcgatgtgttcctaatacgtaatctaagtgtattgggaacattttgc 64
Query: 74 attcatagttttgt 87
|||| |||||||||
Sbjct: 65 attcgtagttttgt 78
>34101_ssc-mir-450c:mirbase
Length = 81
Score = 115 bits (58), Expect = 6e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 14 ctaaactatttttgcgatgtgttcctaatacgtaatataaatgtattggggacattttgc 73
|||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||
Sbjct: 5 ctaaactatttttgcgatgtgttcctaatacgtaatctaagtgtattgggaacattttgc 64
Query: 74 attcatagttttgt 87
|||| |||||||||
Sbjct: 65 attcgtagttttgt 78
>27182_eca-mir-450a:mirbase
Length = 91
Score = 103 bits (52), Expect = 2e-23
Identities = 79/88 (89%)
Strand = Plus / Plus
Query: 6 gaaagatgctaaactatttttgcgatgtgttcctaatacgtaatataaatgtattgggga 65
||||||||||||||| |||||||||||||||||||||| | | ||||||| |||||||
Sbjct: 1 gaaagatgctaaactgtttttgcgatgtgttcctaatatgcagtataaatatattgggag 60
Query: 66 cattttgcattcatagttttgtatcaat 93
|||||||||| ||| |||||||||||||
Sbjct: 61 cattttgcatgcatggttttgtatcaat 88
>34097_ssc-mir-450a:mirbase
Length = 106
Score = 99.6 bits (50), Expect = 4e-22
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 2 caaagaaagatgctaaactatttttgcgatgtgttcctaatacgtaatataaatgtattg 61
||||||||||||||||||| ||||||||||||||||||||| | | ||||||| |||||
Sbjct: 7 caaagaaagatgctaaactggttttgcgatgtgttcctaatatgcagtataaatatattg 66
Query: 62 gggacattttgcattcatagttttgtatca 91
|| |||||||||| ||| |||||||||||
Sbjct: 67 ggagcattttgcatgcatggttttgtatca 96
>27909_mml-mir-450a-1:mirbase
Length = 91
Score = 95.6 bits (48), Expect = 6e-21
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 14 ctaaactatttttgcgatgtgttcctaatacgtaatataaatgtattggggacattttgc 73
||||||| |||||||||||||||||||||| ||| ||||||| ||||||| |||||||||
Sbjct: 9 ctaaactgtttttgcgatgtgttcctaatatgtactataaatatattgggaacattttgc 68
Query: 74 attcatagttttgtatcaat 93
|| |||||||||||||||
Sbjct: 69 atgtgtagttttgtatcaat 88
>28657_hsa-mir-450a-1:mirbase
Length = 91
Score = 95.6 bits (48), Expect = 6e-21
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 14 ctaaactatttttgcgatgtgttcctaatacgtaatataaatgtattggggacattttgc 73
||||||| |||||||||||||||||||||| | | ||||||| ||||||| |||||||||
Sbjct: 9 ctaaactgtttttgcgatgtgttcctaatatgcactataaatatattgggaacattttgc 68
Query: 74 attcatagttttgtatcaat 93
|| ||||||||||||||||
Sbjct: 69 atgtatagttttgtatcaat 88
>30379_ptr-mir-450a-1:mirbase
Length = 90
Score = 95.6 bits (48), Expect = 6e-21
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 14 ctaaactatttttgcgatgtgttcctaatacgtaatataaatgtattggggacattttgc 73
||||||| |||||||||||||||||||||| | | ||||||| ||||||| |||||||||
Sbjct: 9 ctaaactgtttttgcgatgtgttcctaatatgcactataaatatattgggaacattttgc 68
Query: 74 attcatagttttgtatcaat 93
|| ||||||||||||||||
Sbjct: 69 atgtatagttttgtatcaat 88
>33382_bta-mir-450-1:mirbase
Length = 82
Score = 87.7 bits (44), Expect = 1e-18
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 18 actatttttgcgatgtgttcctaatacgtaatataaatgtattggggacattttgcattc 77
|||||||||||||||||||||||||| | | ||||||| ||||||| |||||||||| |
Sbjct: 1 actatttttgcgatgtgttcctaatatgcagtataaatatattgggagcattttgcatgc 60
Query: 78 atagttttgtatcaat 93
|| |||||||||||||
Sbjct: 61 atggttttgtatcaat 76
>26848_cfa-mir-450a:mirbase
Length = 91
Score = 79.8 bits (40), Expect = 3e-16
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 6 gaaagatgctaaactatttttgcgatgtgttcctaatacgtaatataaatgtattgggga 65
|||||||||| |||| |||||||||||||||||||||| | | ||| || |||||||
Sbjct: 1 gaaagatgctgaactgtttttgcgatgtgttcctaatatgcagtatgaacatattgggag 60
Query: 66 cattttgcattcatagttttgtatcaat 93
|||||||||| ||| |||||||||||||
Sbjct: 61 cattttgcatgcatggttttgtatcaat 88
>31010_ppy-mir-450a-1:mirbase
Length = 91
Score = 79.8 bits (40), Expect = 3e-16
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 14 ctaaactatttttgcgatgtgttcctaatacgtaatataaatgtattggggacattttgc 73
||||||| |||||||||||||||||||||| | | |||||| ||||||| |||||||||
Sbjct: 9 ctaaactgtttttgcgatgtgttcctaatatgcacaataaatatattgggaacattttgc 68
Query: 74 attcatagttttgtatcaat 93
|| ||||||| ||||||||
Sbjct: 69 atgtatagtttggtatcaat 88
>27183_eca-mir-450b:mirbase
Length = 79
Score = 77.8 bits (39), Expect = 1e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
||||||||| || ||||||| |||| ||||||||| ||||||||| ||||||||||| ||
Sbjct: 9 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggaacattttgcatcca 68
Query: 79 tagttttgtat 89
|||||||||||
Sbjct: 69 tagttttgtat 79
>27184_eca-mir-450b:mirbase
Length = 79
Score = 77.8 bits (39), Expect = 1e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
||||||||| || ||||||| |||| ||||||||| ||||||||| ||||||||||| ||
Sbjct: 9 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggaacattttgcatcca 68
Query: 79 tagttttgtat 89
|||||||||||
Sbjct: 69 tagttttgtat 79
>34098_ssc-mir-450b:mirbase
Length = 80
Score = 71.9 bits (36), Expect = 8e-14
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
||||||||| || ||||||| |||| ||||||||| | ||||||| ||||||||||| ||
Sbjct: 6 tatttttgcaatatgttcctgaatatgtaatataagtatattgggaacattttgcatcca 65
Query: 79 tagttttgtatc 90
||||||||||||
Sbjct: 66 tagttttgtatc 77
>34099_ssc-mir-450b:mirbase
Length = 80
Score = 71.9 bits (36), Expect = 8e-14
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
||||||||| || ||||||| |||| ||||||||| | ||||||| ||||||||||| ||
Sbjct: 6 tatttttgcaatatgttcctgaatatgtaatataagtatattgggaacattttgcatcca 65
Query: 79 tagttttgtatc 90
||||||||||||
Sbjct: 66 tagttttgtatc 77
>28659_hsa-mir-450b:mirbase
Length = 78
Score = 69.9 bits (35), Expect = 3e-13
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
||||||||| || ||||||| |||| ||||||||| ||||||||| |||||||||| ||
Sbjct: 8 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatcca 67
Query: 79 tagttttgtat 89
|||||||||||
Sbjct: 68 tagttttgtat 78
>28660_hsa-mir-450b:mirbase
Length = 78
Score = 69.9 bits (35), Expect = 3e-13
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
||||||||| || ||||||| |||| ||||||||| ||||||||| |||||||||| ||
Sbjct: 8 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatcca 67
Query: 79 tagttttgtat 89
|||||||||||
Sbjct: 68 tagttttgtat 78
>31012_ppy-mir-450b:mirbase
Length = 78
Score = 69.9 bits (35), Expect = 3e-13
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
||||||||| || ||||||| |||| ||||||||| ||||||||| |||||||||| ||
Sbjct: 8 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatcca 67
Query: 79 tagttttgtat 89
|||||||||||
Sbjct: 68 tagttttgtat 78
>31013_ppy-mir-450b:mirbase
Length = 78
Score = 69.9 bits (35), Expect = 3e-13
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
||||||||| || ||||||| |||| ||||||||| ||||||||| |||||||||| ||
Sbjct: 8 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatcca 67
Query: 79 tagttttgtat 89
|||||||||||
Sbjct: 68 tagttttgtat 78
>30381_ptr-mir-450b:mirbase
Length = 77
Score = 67.9 bits (34), Expect = 1e-12
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
||||||||| || ||||||| |||| ||||||||| ||||||||| |||||||||| ||
Sbjct: 8 tatttttgcaatatgttcctgaatatgtaatataagtgtattgggatcattttgcatcca 67
Query: 79 tagttttgta 88
||||||||||
Sbjct: 68 tagttttgta 77
>32080_mmu-mir-450a-1:mirbase
Length = 91
Score = 63.9 bits (32), Expect = 2e-11
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 22 tttttgcgatgtgttcctaatacgtaatataaatgtattggggacattttgcattcatag 81
|||||||||||||||||||||| || ||||| | ||||||| ||||||||||| ||||
Sbjct: 17 tttttgcgatgtgttcctaatatgtgctataattatattgggaacattttgcataaatag 76
Query: 82 ttttgtatcaat 93
||||| |||||
Sbjct: 77 ctttgtgtcaat 88
>32081_mmu-mir-450a-2:mirbase
Length = 69
Score = 61.9 bits (31), Expect = 8e-11
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 17 aactatttttgcgatgtgttcctaatacgtaatataaatgtattggggacattttgcatt 76
||||||||||||||||||||||||||| ||| ||| | | ||||||||| ||||||||
Sbjct: 2 aactatttttgcgatgtgttcctaatatgtactatgagtatattggggatgctttgcatt 61
Query: 77 cat 79
|||
Sbjct: 62 cat 64
>27911_mml-mir-450b:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 2e-08
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
||||||||| || ||||||| |||| ||| ||||| |||||||| |||||||||| ||
Sbjct: 8 tatttttgcaatatgttcctgaatatgtagtataagcgtattgggatcattttgcatcca 67
Query: 79 tagttttgtat 89
|||||||||||
Sbjct: 68 tagttttgtat 78
>27912_mml-mir-450b:mirbase
Length = 78
Score = 54.0 bits (27), Expect = 2e-08
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
||||||||| || ||||||| |||| ||| ||||| |||||||| |||||||||| ||
Sbjct: 8 tatttttgcaatatgttcctgaatatgtagtataagcgtattgggatcattttgcatcca 67
Query: 79 tagttttgtat 89
|||||||||||
Sbjct: 68 tagttttgtat 78
>26849_cfa-mir-450b:mirbase
Length = 58
Score = 52.0 bits (26), Expect = 8e-08
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 23 ttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcat 75
|||||| || ||||||| |||| ||||||||| ||||||||| |||||||||||
Sbjct: 1 ttttgcaatatgttcctgaatatgtaatataagtgtattgggaacattttgcat 54
>32082_mmu-mir-450b:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
||||||||| | ||||||| ||||| ||| |||| |||||||| ||||||||||| ||
Sbjct: 11 tatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttgcatgca 70
Query: 79 tagttttgtatc 90
|| |||||||||
Sbjct: 71 taattttgtatc 82
>32083_mmu-mir-450b:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 20 tatttttgcgatgtgttcct-aatacgtaatataaatgtattggggacattttgcattca 78
||||||||| | ||||||| ||||| ||| |||| |||||||| ||||||||||| ||
Sbjct: 11 tatttttgcagtatgttcctgaatacataacataagcgtattgggaacattttgcatgca 70
Query: 79 tagttttgtatc 90
|| |||||||||
Sbjct: 71 taattttgtatc 82
>32918_rno-mir-450a:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 22 tttttgcgatgtgttcctaatacgtaatataaatgtattggggacattttgcattcatag 81
||||||||||||||||||||| || || || | ||||||| ||||||||||| ||||
Sbjct: 17 tttttgcgatgtgttcctaatgtgtgctacaattatattgggaacattttgcataaatag 76
Query: 82 tttt 85
||||
Sbjct: 77 tttt 80
