miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28872_hsa-mir-558:mirbase
Length = 94
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 20 gttattttggtatagtagctctaggctctattatagtttcctgagctgctgtaccaaaat 79
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 20 gttattttggtatagtagctctagactctattatagtttcctgagctgctgtaccaaaat 79
Query: 80 accacaaacaggctg 94
||||||||| |||||
Sbjct: 80 accacaaacgggctg 94
>30500_ptr-mir-558:mirbase
Length = 93
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 20 gttattttggtatagtagctctaggctctattatagtttcctgagctgctgtaccaaaat 79
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 19 gttattttggtatagtagctctagactctattatagtttcctgagctgctgtaccaaaat 78
Query: 80 accacaaa 87
||||||||
Sbjct: 79 accacaaa 86
>28013_mml-mir-558:mirbase
Length = 94
Score = 119 bits (60), Expect = 4e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 21 ttattttggtatagtagctctaggctctattatagtttcctgagctgctgtaccaaaata 80
||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 21 ttattttggcatagtagctctagactctattatagtttcctgagctgctgtaccaaaata 80
Query: 81 ccacaaac 88
||||||||
Sbjct: 81 ccacaaac 88
