miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28108_mml-mir-671:mirbase
Length = 118
Score = 234 bits (118), Expect = 1e-62
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 1 gcaggtgaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaggtgaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggat 60
Query: 61 gttttcctccggttctcagggctccacctctttcgggccgtagagccagggctggtgc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttttcctccggttctcagggctccacctctttcgggccgtagagccagggctggtgc 118
>28109_mml-mir-671:mirbase
Length = 118
Score = 234 bits (118), Expect = 1e-62
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 1 gcaggtgaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaggtgaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggat 60
Query: 61 gttttcctccggttctcagggctccacctctttcgggccgtagagccagggctggtgc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttttcctccggttctcagggctccacctctttcgggccgtagagccagggctggtgc 118
>28988_hsa-mir-671:mirbase
Length = 118
Score = 234 bits (118), Expect = 1e-62
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 1 gcaggtgaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaggtgaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggat 60
Query: 61 gttttcctccggttctcagggctccacctctttcgggccgtagagccagggctggtgc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttttcctccggttctcagggctccacctctttcgggccgtagagccagggctggtgc 118
>28989_hsa-mir-671:mirbase
Length = 118
Score = 234 bits (118), Expect = 1e-62
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 1 gcaggtgaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaggtgaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggat 60
Query: 61 gttttcctccggttctcagggctccacctctttcgggccgtagagccagggctggtgc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttttcctccggttctcagggctccacctctttcgggccgtagagccagggctggtgc 118
>31233_ppy-mir-671:mirbase
Length = 118
Score = 234 bits (118), Expect = 1e-62
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 1 gcaggtgaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaggtgaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggat 60
Query: 61 gttttcctccggttctcagggctccacctctttcgggccgtagagccagggctggtgc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttttcctccggttctcagggctccacctctttcgggccgtagagccagggctggtgc 118
>30588_ptr-mir-671:mirbase
Length = 117
Score = 232 bits (117), Expect = 5e-62
Identities = 117/117 (100%)
Strand = Plus / Plus
Query: 2 caggtgaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggtgaactggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatg 60
Query: 62 ttttcctccggttctcagggctccacctctttcgggccgtagagccagggctggtgc 118
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttcctccggttctcagggctccacctctttcgggccgtagagccagggctggtgc 117
>33447_bta-mir-671:mirbase
Length = 118
Score = 192 bits (97), Expect = 4e-50
Identities = 106/109 (97%)
Strand = Plus / Plus
Query: 10 ctggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctc 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ctggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctc 69
Query: 70 cggttctcagggctccacctctttcgggccgtagagccagggctggtgc 118
|||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct: 70 cggttctcagggctccaccttttccgggccgtggagccagggctggtgc 118
>32284_mmu-mir-671:mirbase
Length = 98
Score = 186 bits (94), Expect = 2e-48
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 11 tggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctcc 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctcc 60
Query: 71 ggttctcagggctccacctctttcgggccgtagagcca 108
||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 ggttctcagggctccacctctttcgagccgtagagcca 98
>32285_mmu-mir-671:mirbase
Length = 98
Score = 186 bits (94), Expect = 2e-48
Identities = 97/98 (98%)
Strand = Plus / Plus
Query: 11 tggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctcc 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggcaggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctcc 60
Query: 71 ggttctcagggctccacctctttcgggccgtagagcca 108
||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 ggttctcagggctccacctctttcgagccgtagagcca 98
>27253_eca-mir-671:mirbase
Length = 84
Score = 159 bits (80), Expect = 6e-40
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 16 ggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctccggttc 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctccggttc 60
Query: 76 tcagggctccacctctttcgggcc 99
||||||||||||||||| ||||||
Sbjct: 61 tcagggctccacctcttccgggcc 84
>27254_eca-mir-671:mirbase
Length = 84
Score = 159 bits (80), Expect = 6e-40
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 16 ggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctccggttc 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggccaggaagaggaggaagccctggaggggctggaggtgatggatgttttcctccggttc 60
Query: 76 tcagggctccacctctttcgggcc 99
||||||||||||||||| ||||||
Sbjct: 61 tcagggctccacctcttccgggcc 84
>32974_rno-mir-671:mirbase
Length = 81
Score = 153 bits (77), Expect = 3e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 19 caggaagaggaggaagccctggaggggctggaggtgatggatgttttcctccggttctca 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggaagaggaggaagccctggaggggctggaggtgatggatgttttcctccggttctca 60
Query: 79 gggctccacctctttcg 95
|||||||||||||||||
Sbjct: 61 gggctccacctctttcg 77
>26899_cfa-mir-671:mirbase
Length = 74
Score = 147 bits (74), Expect = 2e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 19 caggaagaggaggaagccctggaggggctggaggtgatggatgttttcctccggttctca 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggaagaggaggaagccctggaggggctggaggtgatggatgttttcctccggttctca 60
Query: 79 gggctccacctctt 92
||||||||||||||
Sbjct: 61 gggctccacctctt 74
