miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28111_mml-mir-708:mirbase
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 aactgccctcaaggagcttacaatctagctgggggtaaatgacttgcacatgaacacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactgccctcaaggagcttacaatctagctgggggtaaatgacttgcacatgaacacaac 60
Query: 61 tagactgtgagcttctagagggcaggga 88
||||||||||||||||||||||||||||
Sbjct: 61 tagactgtgagcttctagagggcaggga 88
>28992_hsa-mir-708:mirbase
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 aactgccctcaaggagcttacaatctagctgggggtaaatgacttgcacatgaacacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactgccctcaaggagcttacaatctagctgggggtaaatgacttgcacatgaacacaac 60
Query: 61 tagactgtgagcttctagagggcaggga 88
||||||||||||||||||||||||||||
Sbjct: 61 tagactgtgagcttctagagggcaggga 88
>30589_ptr-mir-708:mirbase
Length = 87
Score = 172 bits (87), Expect = 3e-44
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 aactgccctcaaggagcttacaatctagctgggggtaaatgacttgcacatgaacacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactgccctcaaggagcttacaatctagctgggggtaaatgacttgcacatgaacacaac 60
Query: 61 tagactgtgagcttctagagggcaggg 87
|||||||||||||||||||||||||||
Sbjct: 61 tagactgtgagcttctagagggcaggg 87
>27259_eca-mir-708:mirbase
Length = 93
Score = 165 bits (83), Expect = 6e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 1 aactgccctcaaggagcttacaatctagctgggggtaaatgacttgcacatgaacacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4 aactgccctcaaggagcttacaatctagctgggggtaaatgacttgcacatgaacgcaac 63
Query: 61 tagactgtgagcttctagagggcaggg 87
|||||||||||||||||||||||||||
Sbjct: 64 tagactgtgagcttctagagggcaggg 90
>32328_mmu-mir-708:mirbase
Length = 109
Score = 155 bits (78), Expect = 6e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 2 actgccctcaaggagcttacaatctagctgggggtaaatgacttgcacatgaacacaact 61
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 18 actgccctcaaggagcttacaatctagctgggggtagatgacttgcacttgaacacaact 77
Query: 62 agactgtgagcttctagagggcaggg 87
||||||||||||||||||||||||||
Sbjct: 78 agactgtgagcttctagagggcaggg 103
>32983_rno-mir-708:mirbase
Length = 88
Score = 155 bits (78), Expect = 6e-39
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 2 actgccctcaaggagcttacaatctagctgggggtaaatgacttgcacatgaacacaact 61
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 2 actgccctcaaggagcttacaatctagctgggggtagatgacttgcacttgaacacaact 61
Query: 62 agactgtgagcttctagagggcaggg 87
||||||||||||||||||||||||||
Sbjct: 62 agactgtgagcttctagagggcaggg 87
>33449_bta-mir-708:mirbase
Length = 109
Score = 151 bits (76), Expect = 1e-37
Identities = 85/88 (96%)
Strand = Plus / Plus
Query: 1 aactgccctcaaggagcttacaatctagctgggggtaaatgacttgcacatgaacacaac 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |
Sbjct: 17 aactgccctcaaggagcttacaatctagctgggggtaaacgacttgcacatgaacgcatc 76
Query: 61 tagactgtgagcttctagagggcaggga 88
||||||||||||||||||||||||||||
Sbjct: 77 tagactgtgagcttctagagggcaggga 104
>34131_ssc-mir-708:mirbase
Length = 80
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 6 ccctcaaggagcttacaatctagctgggggtaaatgacttgcacatgaacacaactagac 65
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 1 ccctcaaggagcttacaatctagctgggggtgaatgacttgcacatgaacgcaactagac 60
Query: 66 tgtgagcttctagagggcag 85
||||||||||||||||||||
Sbjct: 61 tgtgagcttctagagggcag 80
>34132_ssc-mir-708:mirbase
Length = 80
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 6 ccctcaaggagcttacaatctagctgggggtaaatgacttgcacatgaacacaactagac 65
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 1 ccctcaaggagcttacaatctagctgggggtgaatgacttgcacatgaacgcaactagac 60
Query: 66 tgtgagcttctagagggcag 85
||||||||||||||||||||
Sbjct: 61 tgtgagcttctagagggcag 80
>26901_cfa-mir-708:mirbase
Length = 69
Score = 105 bits (53), Expect = 5e-24
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 11 aaggagcttacaatctagctgggggtaaatgacttgcacatgaacacaactagactgtga 70
|||||||||||||||||||||||||| || | ||||||||||||| ||||||||||||||
Sbjct: 1 aaggagcttacaatctagctgggggtgaacggcttgcacatgaacgcaactagactgtga 60
Query: 71 gcttctaga 79
|||||||||
Sbjct: 61 gcttctaga 69
>27600_sla-mir-28:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 3 ctgccctcaaggagcttacaatctag 28
|||||||| |||||||||||||||||
Sbjct: 81 ctgccctccaggagcttacaatctag 56
>27055_eca-mir-151:mirbase
Length = 69
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 28 actagactgtgagctcctcgagggcagg 1
>27760_mml-mir-151:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 31 actagactgtgagctcctcgagggcagg 4
>27761_mml-mir-151:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 31 actagactgtgagctcctcgagggcagg 4
>28475_hsa-mir-151:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 31 actagactgtgagctcctcgagggcagg 4
>28476_hsa-mir-151:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 31 actagactgtgagctcctcgagggcagg 4
>30246_ptr-mir-151:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 31 actagactgtgagctcctcgagggcagg 4
>30859_ppy-mir-151:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 31 actagactgtgagctcctcgagggcagg 4
>30860_ppy-mir-151:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 31 actagactgtgagctcctcgagggcagg 4
>31886_mmu-mir-151:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 28 actagactgtgagctcctcgagggcagg 1
>31887_mmu-mir-151:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 28 actagactgtgagctcctcgagggcagg 1
>32758_rno-mir-151:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 36 actagactgtgagctcctcgagggcagg 9
>33084_rno-mir-3586:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 62 actagactgtgagctcctcgagggcagg 89
>33085_rno-mir-3586:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 62 actagactgtgagctcctcgagggcagg 89
>33238_bta-mir-151:mirbase
Length = 69
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 28 actagactgtgagctcctcgagggcagg 1
>34001_ssc-mir-151:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 32 actagactgtgagctcctcgagggcagg 5
>34002_ssc-mir-151:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 59 actagactgtgagcttctagagggcagg 86
||||||||||||||| || |||||||||
Sbjct: 32 actagactgtgagctcctcgagggcagg 5
