miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28996_hsa-mir-744:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 ttgggcaaggtgcggggctagggctaacagcagtcttactgaaggtttcctggaaaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgggcaaggtgcggggctagggctaacagcagtcttactgaaggtttcctggaaaccac 60
Query: 61 gcacatgctgttgccactaacctcaaccttactcggtc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcacatgctgttgccactaacctcaaccttactcggtc 98
>30593_ptr-mir-744:mirbase
Length = 97
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 ttgggcaaggtgcggggctagggctaacagcagtcttactgaaggtttcctggaaaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgggcaaggtgcggggctagggctaacagcagtcttactgaaggtttcctggaaaccac 60
Query: 61 gcacatgctgttgccactaacctcaaccttactcggt 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcacatgctgttgccactaacctcaaccttactcggt 97
>32345_mmu-mir-744:mirbase
Length = 100
Score = 176 bits (89), Expect = 2e-45
Identities = 95/97 (97%)
Strand = Plus / Plus
Query: 2 tgggcaaggtgcggggctagggctaacagcagtcttactgaaggtttcctggaaaccacg 61
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4 tgggcaaggtgcggggctagggctaacagcagtcttactgacggtttcctggaaaccaca 63
Query: 62 cacatgctgttgccactaacctcaaccttactcggtc 98
|||||||||||||||||||||||||||||||||||||
Sbjct: 64 cacatgctgttgccactaacctcaaccttactcggtc 100
>34133_ssc-mir-744:mirbase
Length = 80
Score = 151 bits (76), Expect = 1e-37
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 9 ggtgcggggctagggctaacagcagtcttactgaaggtttcctggaaaccacgcacatgc 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ggtgcggggctagggctaacagcagtcttactgaaggtttcctggaaaccacgcacatgc 64
Query: 69 tgttgccactaacctc 84
||||||||||||||||
Sbjct: 65 tgttgccactaacctc 80
>33450_bta-mir-744:mirbase
Length = 100
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 9 ggtgcggggctagggctaacagcagtcttactgaaggtttcctggaaaccacgcacatgc 68
||||||||||||||||||||||||| || ||||| ||||||| |||||||||||||||||
Sbjct: 11 ggtgcggggctagggctaacagcaggctcactgacggtttcccggaaaccacgcacatgc 70
Query: 69 tgttgccactaacctcaaccttactcggtc 98
||||||||||||||||||||||||||||||
Sbjct: 71 tgttgccactaacctcaaccttactcggtc 100
