miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31245_ppy-mir-767:mirbase
Length = 109
Score = 216 bits (109), Expect = 3e-57
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1 gcttttatactgtaggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcttttatactgtaggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttg 60
Query: 61 tctgctcataccccatggtttctgagcaggaaccttcattgtctactgc 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctgctcataccccatggtttctgagcaggaaccttcattgtctactgc 109
>29005_hsa-mir-767:mirbase
Length = 109
Score = 208 bits (105), Expect = 6e-55
Identities = 108/109 (99%)
Strand = Plus / Plus
Query: 1 gcttttatactgtaggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttg 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcttttatattgtaggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttg 60
Query: 61 tctgctcataccccatggtttctgagcaggaaccttcattgtctactgc 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctgctcataccccatggtttctgagcaggaaccttcattgtctactgc 109
>29006_hsa-mir-767:mirbase
Length = 109
Score = 208 bits (105), Expect = 6e-55
Identities = 108/109 (99%)
Strand = Plus / Plus
Query: 1 gcttttatactgtaggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttg 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcttttatattgtaggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttg 60
Query: 61 tctgctcataccccatggtttctgagcaggaaccttcattgtctactgc 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctgctcataccccatggtttctgagcaggaaccttcattgtctactgc 109
>28122_mml-mir-767:mirbase
Length = 110
Score = 200 bits (101), Expect = 1e-52
Identities = 107/109 (98%)
Strand = Plus / Plus
Query: 1 gcttttatactgtaggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttg 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcttttatattgtaggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttg 60
Query: 61 tctgctcataccccatggtttctgagcaggaaccttcattgtctactgc 109
|||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 61 tctgctcataccccatggtttctgagcaggaatcttcattgtctactgc 109
>28123_mml-mir-767:mirbase
Length = 110
Score = 200 bits (101), Expect = 1e-52
Identities = 107/109 (98%)
Strand = Plus / Plus
Query: 1 gcttttatactgtaggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttg 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcttttatattgtaggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttg 60
Query: 61 tctgctcataccccatggtttctgagcaggaaccttcattgtctactgc 109
|||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 61 tctgctcataccccatggtttctgagcaggaatcttcattgtctactgc 109
>27266_eca-mir-767:mirbase
Length = 108
Score = 167 bits (84), Expect = 2e-42
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 13 taggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttgtctgctcatacc 72
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 taggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttgtctgctcatact 72
Query: 73 ccatggtttctgagcaggaaccttcattgtctactg 108
|||||||| |||||||||||||||||||| ||||||
Sbjct: 73 ccatggttcctgagcaggaaccttcattgcctactg 108
>27267_eca-mir-767:mirbase
Length = 108
Score = 167 bits (84), Expect = 2e-42
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 13 taggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttgtctgctcatacc 72
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 taggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttgtctgctcatact 72
Query: 73 ccatggtttctgagcaggaaccttcattgtctactg 108
|||||||| |||||||||||||||||||| ||||||
Sbjct: 73 ccatggttcctgagcaggaaccttcattgcctactg 108
>33457_bta-mir-767:mirbase
Length = 105
Score = 155 bits (78), Expect = 8e-39
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 13 taggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttgtctgctcatacc 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 taggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttgtctgctcatacc 69
Query: 73 ccatggtttctgagcaggaacc 94
|||||||| |||||||||||||
Sbjct: 70 ccatggttcctgagcaggaacc 91
>32355_mmu-mir-767:mirbase
Length = 107
Score = 97.6 bits (49), Expect = 2e-21
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 13 taggtttttgctcatgcaccatggttgtctgagcatgcagcatgcttgtctgctcatacc 72
||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 11 taggtttttactcatgcaccatggttgtctgagcacataacatgcttgtctgctcatacc 70
Query: 73 ccatggtttctgagcaggaaccttcattgtctactgc 109
| |||||| |||| ||||| ||| | ||||||||||
Sbjct: 71 ctatggttcctgaagaggaatcttaactgtctactgc 107
