miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00888;mir-770;AANU01197813.1/26259-26356 9544:Macaca mulatta
(rhesus monkey)
Length = 98
Score = 192 bits (97), Expect = 6e-49
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 aggagccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aggagccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtg 61
Query: 61 ggcctgatgtggtgctggggcctcaggggtctgctct 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggcctgatgtggtgctggggcctcaggggtctgctct 98
>RF00888;mir-770;ABRO01129501.1/1686-1781 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 96
Score = 77.8 bits (39), Expect = 2e-14
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 4 agccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtgggc 63
|||||||||| | ||| |||| |||||||||| ||||||| ||||| |||| |||||||
Sbjct: 2 agccaccttctgtgcccccagcaccacgtgtctgggccacgtgagcacggccacgtgggc 61
Query: 64 ctgatgtggtgctggggcctcaggggtctgc 94
|||| |||| ||| ||||| |||||||||||
Sbjct: 62 ctgacgtggggctagggccgcaggggtctgc 92
>RF00888;mir-770;ABRN01400939.1/11657-11708 9739:Tursiops
truncatus (bottlenosed dolphin)
Length = 52
Score = 60.0 bits (30), Expect = 6e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 27 ccacgtgtcagggccacatgagctgggcctcgtgggcctgatgtgg 72
||||||||| ||||||| ||||| ||||||||||||||||| ||||
Sbjct: 4 ccacgtgtctgggccacgtgagcagggcctcgtgggcctgaggtgg 49
>RF00888;mir-770;AAWR02020057.1/98240-98339 9796:Equus caballus
(horse)
Length = 100
Score = 56.0 bits (28), Expect = 9e-08
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 9 ccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtgggcctgat 68
||||||| |||||||| |||||||||| |||||| ||||| || | | |||||| |||
Sbjct: 11 ccttccgtgcctccagcaccacgtgtctgggccatgtgagcaaggtcacatgggcccgat 70
Query: 69 gtggtgctgggg 80
||||||||||||
Sbjct: 71 gtggtgctgggg 82
