miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28140_mml-mir-892b:mirbase
Length = 77
Score = 145 bits (73), Expect = 5e-36
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 1 tgcagtgccctactcagaaaggtgccatttatgtagattatatgtcactggctcctttct 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcaatgccctactcagaaaggtgccatttatgtagattatatgtcactggctcctttct 60
Query: 61 gggtagagtaaggctca 77
|||||||||||||||||
Sbjct: 61 gggtagagtaaggctca 77
>29027_hsa-mir-892b:mirbase
Length = 77
Score = 129 bits (65), Expect = 3e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 1 tgcagtgccctactcagaaaggtgccatttatgtagattatatgtcactggctcctttct 60
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 tgcaatgccctactcagaaaggtgccatttatgtagattttatgtcactggctcctttct 60
Query: 61 gggtagagtaaggctca 77
|||||||| ||||||||
Sbjct: 61 gggtagagcaaggctca 77
>30615_ptr-mir-892b:mirbase
Length = 73
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 2 gcagtgccctactcagaaaggtgccatttatgtagattatatgtcactggctcctttctg 61
||||||||||| |||||||||||||| | | ||||||| ||||||||| |||||||||
Sbjct: 1 gcagtgccctattcagaaaggtgccagtcacttagattacatgtcactgtttcctttctg 60
Query: 62 ggtagagtaaggc 74
|| |||||||||
Sbjct: 61 agtggagtaaggc 73
>28139_mml-mir-892:mirbase
Length = 75
Score = 61.9 bits (31), Expect = 6e-11
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 2 gcagtgccctactcagaaaggtgccatttatgtagattatatgtcactggctcctttctg 61
||||||| ||||| |||||||||||| | | || |||| ||||||||| |||||||||
Sbjct: 1 gcagtgctctacttagaaaggtgccagtcacttacattacatgtcactgtgtcctttctg 60
Query: 62 ggtagagtaaggctc 76
||||||||||||||
Sbjct: 61 cgtagagtaaggctc 75
>29026_hsa-mir-892a:mirbase
Length = 75
Score = 61.9 bits (31), Expect = 6e-11
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 2 gcagtgccctactcagaaaggtgccatttatgtagattatatgtcactggctcctttctg 61
|||||||| ||||||||||||||||| | | || | || ||||||||| |||||||||
Sbjct: 1 gcagtgccttactcagaaaggtgccagtcacttacactacatgtcactgtgtcctttctg 60
Query: 62 ggtagagtaaggctc 76
||||||||||||||
Sbjct: 61 cgtagagtaaggctc 75
>31263_ppy-mir-892a:mirbase
Length = 74
Score = 60.0 bits (30), Expect = 2e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 3 cagtgccctactcagaaaggtgccatttatgtagattatatgtcactggctcctttctgg 62
|||||||||||| |||||||||||| | | || | || ||||||||| |||||||||
Sbjct: 1 cagtgccctacttagaaaggtgccagtcacttacactacatgtcactgtgtcctttctgt 60
Query: 63 gtagagtaaggctc 76
||||||||||||||
Sbjct: 61 gtagagtaaggctc 74
>30614_ptr-mir-892a:mirbase
Length = 73
Score = 58.0 bits (29), Expect = 9e-10
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 3 cagtgccctactcagaaaggtgccatttatgtagattatatgtcactggctcctttctgg 62
||||||| ||||||||||||||||| | | || | || ||||||||| |||||||||
Sbjct: 1 cagtgccttactcagaaaggtgccagtaacttacactacatgtcactgtgtcctttctgc 60
Query: 63 gtagagtaaggct 75
|||||||||||||
Sbjct: 61 gtagagtaaggct 73
