miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00999;mir-924;AANU01220613.1/9696-9748 9544:Macaca mulatta
(rhesus monkey)
Length = 53
Score = 81.8 bits (41), Expect = 6e-16
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 1 aatagagtcttgtgatgtcttgcttaagggccatccaacctagagtcta 49
|||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 1 aatagagtcttgtgttgtcttgcttaaaggccatccaacctagagtcta 49
>RF00999;mir-924;AANU01186454.1/25124-25071 9544:Macaca mulatta
(rhesus monkey)
Length = 54
Score = 48.1 bits (24), Expect = 9e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 10 ttgtgatgtcttgcttaagggccatcca 37
|||||||||||||||||| |||||||||
Sbjct: 11 ttgtgatgtcttgcttaaaggccatcca 38
>RF00999;mir-924;ABRT010045244.1/3436-3488 9478:Tarsius syrichta
(Philippine tarsier)
Length = 53
Score = 44.1 bits (22), Expect = 1e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 9 cttgtgatgtcttgcttaagggccatccaa 38
||||||||||||||||||| | ||||||||
Sbjct: 9 cttgtgatgtcttgcttaaagaccatccaa 38
>RF00999;mir-924;ABRT011151543.1/91-143 9478:Tarsius syrichta
(Philippine tarsier)
Length = 53
Score = 44.1 bits (22), Expect = 1e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 aatagagtcttgtgatgtcttgcttaagggccatccaa 38
||||||| ||||||||||||||| ||| | ||||||||
Sbjct: 1 aatagagacttgtgatgtcttgcataaagaccatccaa 38
>RF00999;mir-924;ABGA01161263.1/1000-948 9601:Pongo abelii
(Sumatran orangutan)
Length = 53
Score = 42.1 bits (21), Expect = 6e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 4 agagtcttgtgatgtcttgcttaagggccatccaacc 40
|||| ||||||||||| | ||||| ||||||||||||
Sbjct: 4 agagacttgtgatgtcctccttaaaggccatccaacc 40
>RF00999;mir-924;CABD01207823.1/139-86 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 54
Score = 42.1 bits (21), Expect = 6e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 10 ttgtgatgtcttgcttaagggccatccaa 38
|||||||||||||||||| |||||||||
Sbjct: 11 ttgtgatgtcttgcttaaacgccatccaa 39
