miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01039;mir-937;CABD01151683.1/3683-3768 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 86
Score = 131 bits (66), Expect = 2e-30
Identities = 81/86 (94%)
Strand = Plus / Plus
Query: 1 agcactgcccccggtgagtcagggtggggctggccccctgcttcgtgcccttccgcgctc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 agcactgcccccggtgagtcagggtggggctggccccctgcttcgtgcccatccgcgctc 60
Query: 61 tgactctctgcccgcctgcaggagct 86
| || ||||||| ||||||||||||
Sbjct: 61 taaccttctgcccacctgcaggagct 86
>RF01039;mir-937;AANU01106925.1/1175-1090 9544:Macaca mulatta
(rhesus monkey)
Length = 86
Score = 123 bits (62), Expect = 4e-28
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 1 agcactgcccccggtgagtcagggtggggctggccccctgcttcgtgcccttccgcgctc 60
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||
Sbjct: 1 agcactgcccccggtgagtcagggtggggctggccccctgcttcgcgcccatccgcactc 60
Query: 61 tgactctctgcccgcctgcaggagct 86
|||||||| || |||||||||||||
Sbjct: 61 tgactctccacctgcctgcaggagct 86
>RF01039;mir-937;AAQQ01060996.1/829-746 43179:Spermophilus
tridecemlineatus (thirteen-lined ground squirrel)
Length = 84
Score = 46.1 bits (23), Expect = 7e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 agcactgcccccggtgagtcagggtggggctggcc 35
||||||||||||||||||| |||| ||| ||||||
Sbjct: 1 agcactgcccccggtgagtgagggcgggactggcc 35
