miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29038_hsa-mir-939:mirbase
Length = 82
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 12 ctggggagctgaggctctgggagtggccggagctgactctgggcctctgctccccagtgt 71
||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||
Sbjct: 14 ctggggagctgaggctctgggggtggccggggctgaccctgggcctctgctccccagtgt 73
Query: 72 ctgaccgcg 80
|||||||||
Sbjct: 74 ctgaccgcg 82
>30625_ptr-mir-939:mirbase
Length = 81
Score = 111 bits (56), Expect = 7e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 12 ctggggagctgaggctctgggagtggccggagctgactctgggcctctgctccccagtgt 71
||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||
Sbjct: 14 ctggggagctgaggctctgggggtggccggggctgaccctgggcctctgctccccagtgt 73
Query: 72 ctgaccgc 79
||||||||
Sbjct: 74 ctgaccgc 81
>28149_mml-mir-939:mirbase
Length = 83
Score = 95.6 bits (48), Expect = 4e-21
Identities = 64/68 (94%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 12 ctggggagctgaggctctgggagtggccggagctga-ctctgggcctctgctccccagtg 70
||||||||||||||||||||| |||||||| ||||| | |||||||||||||||||||||
Sbjct: 14 ctggggagctgaggctctgggggtggccggggctgacccctgggcctctgctccccagtg 73
Query: 71 tctgaccg 78
||||||||
Sbjct: 74 tctgaccg 81
