miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29046_hsa-mir-944:mirbase
Length = 88
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 1 gttccagacacatctcatctgatctacaatattttcttaaattgtataaagagaaattat 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttccagacacatctcatctgatatacaatattttcttaaattgtataaagagaaattat 60
Query: 61 tgtacatcagatgagctgtgtctgggat 88
|||||||| |||||||||||||||||||
Sbjct: 61 tgtacatcggatgagctgtgtctgggat 88
>30629_ptr-mir-944:mirbase
Length = 87
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 2 ttccagacacatctcatctgatctacaatattttcttaaattgtataaagagaaattatt 61
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttccagacacatctcatctgatatacaatattttcttaaattgtataaagagaaattatt 60
Query: 62 gtacatcagatgagctgtgtctgggat 88
||||||| |||||||||||||||||||
Sbjct: 61 gtacatcggatgagctgtgtctgggat 87
>28152_mml-mir-944:mirbase
Length = 88
Score = 139 bits (70), Expect = 4e-34
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 1 gttccagacacatctcatctgatctacaatattttcttaaattgtataaagagaaattat 60
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 1 gttccagacacatctcatctgatatacaatattttcttaaattgtaaaaagagaaattat 60
Query: 61 tgtacatcagatgagctgtgtctggg 86
|||| |||||||||| ||||||||||
Sbjct: 61 tgtatatcagatgagatgtgtctggg 86
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 4 ccagacacatctcatctgatctacaatattttct 37
|||||||||||||||||||| ||||||| |||||
Sbjct: 85 ccagacacatctcatctgatatacaataatttct 52
