miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00946;mir-1225;AANU01106525.1/745-656 9544:Macaca mulatta
(rhesus monkey)
Length = 90
Score = 137 bits (69), Expect = 3e-32
Identities = 83/90 (92%)
Strand = Plus / Plus
Query: 1 gtgggtacggcccagtnnnnnnnagagggacacgccctgggctctgcccagggtgcagcc 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgggtacggcccagtgggggggagagggacacgccctgggctctgcccagggtgcagcc 60
Query: 61 ggactgactgagcccctgtgccgcccccag 90
||||||||||||||||||||||||||||||
Sbjct: 61 ggactgactgagcccctgtgccgcccccag 90
>RF00946;mir-1225;ABRO01110593.1/5760-5850 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 91
Score = 69.9 bits (35), Expect = 5e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 52 ggtgcagccggactgactgagcccctgtgccgcccccag 90
||||||||||||||||| |||||||||||||||||||||
Sbjct: 53 ggtgcagccggactgaccgagcccctgtgccgcccccag 91
>RF00946;mir-1225;AAKN02007402.1/12328-12238 10141:Cavia porcellus
(domestic guinea pig)
Length = 91
Score = 65.9 bits (33), Expect = 8e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 46 gcccagggtgcagccggactgactgagcccctgtgccgcccccag 90
||||||||||||| | ||||||| |||||||||||||||||||||
Sbjct: 47 gcccagggtgcagtcagactgacagagcccctgtgccgcccccag 91
