miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30650_ptr-mir-1227:mirbase
Length = 87
Score = 141 bits (71), Expect = 9e-35
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 1 gtggggccaggcagtggtgggcactgctggggtgggcacagcagccatgcagagcaggca 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggggccaggcggtggtgggcactgctggggtgggcacagcagccatgcagagcaggca 60
Query: 61 tctgaccacatgccacccttttcccca 87
| ||||| | |||||||||||||||||
Sbjct: 61 tttgaccccgtgccacccttttcccca 87
>29074_hsa-mir-1227:mirbase
Length = 88
Score = 135 bits (68), Expect = 6e-33
Identities = 83/88 (94%)
Strand = Plus / Plus
Query: 1 gtggggccaggcagtggtgggcactgctggggtgggcacagcagccatgcagagcaggca 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gtggggccaggcggtggtgggcactgctggggtgggcacagcagccatgcagagcgggca 60
Query: 61 tctgaccacatgccacccttttccccag 88
| ||||| | ||||||||||||||||||
Sbjct: 61 tttgaccccgtgccacccttttccccag 88
>28157_mml-mir-1227:mirbase
Length = 88
Score = 119 bits (60), Expect = 3e-28
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 1 gtggggccaggcagtggtgggcactgctggggtgggcacagcagccatgcagagcaggca 60
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggggccaggcggtggtgggcaccgctggggtgggcacagcagccatgcagagcaggca 60
Query: 61 tctgaccacatgccacccttttccccag 88
|||||| | ||||| ||| ||||||||
Sbjct: 61 gctgaccccgtgccatcctcttccccag 88
