miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29102_hsa-mir-1255b-1:mirbase
Length = 63
Score = 95.6 bits (48), Expect = 3e-21
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 1 ggatgagcaaagaaagtggtttcttgcaatggaatctactccttgtgaagatgctgtgaa 60
||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 4 ggatgagcaaagaaagtggtttcttaaaatggaatctactctttgtgaagatgctgtgaa 63
>27289_eca-mir-1255b:mirbase
Length = 63
Score = 79.8 bits (40), Expect = 2e-16
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 1 ggatgagcaaagaaagtggtttcttgcaatggaatctactccttgtgaagatgctgtgaa 60
|||| |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||
Sbjct: 4 ggataagcaaagaaagtggtttctttaaatggaaactactcctggtgaagatgctgtgaa 63
>29103_hsa-mir-1255b-2:mirbase
Length = 67
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1 ggatgagcaaagaaagtggtttcttg 26
||||||||||||||||||||||||||
Sbjct: 60 ggatgagcaaagaaagtggtttcttg 35
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggatgagcaaagaaagtggttt 22
||||||||||||||||||||||
Sbjct: 7 ggatgagcaaagaaagtggttt 28
>30677_ptr-mir-1255b:mirbase
Length = 66
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1 ggatgagcaaagaaagtggtttcttg 26
||||||||||||||||||||||||||
Sbjct: 59 ggatgagcaaagaaagtggtttcttg 34
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggatgagcaaagaaagtggttt 22
||||||||||||||||||||||
Sbjct: 6 ggatgagcaaagaaagtggttt 27
>31317_ppy-mir-1255b-2:mirbase
Length = 67
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggatgagcaaagaaagtggttt 22
||||||||||||||||||||||
Sbjct: 7 ggatgagcaaagaaagtggttt 28
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 ggatgagcaaagaaagtggtttcttg 26
||||||||||||||||||| ||||||
Sbjct: 60 ggatgagcaaagaaagtggcttcttg 35
