miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00994;mir-1255;AAWR02037001.1/98951-98886 9796:Equus caballus
(horse)
Length = 66
Score = 79.8 bits (40), Expect = 3e-15
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 1 ggatgagcaaagaaagtggtttcttgcaatggaatctactccttgtgaagatgctgtgaa 60
||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 7 ggatgggcaaagaaagtggtttcttgagatggaatctactcccggtgaagatgctgtgaa 66
>RF00994;mir-1255;AAGU02483741.1/5853-5918 9785:Loxodonta africana
(African savanna elephant)
Length = 66
Score = 71.9 bits (36), Expect = 8e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 1 ggatgagcaaagaaagtggtttcttgcaatggaatctactccttgtgaagatgctgtgaa 60
|||||||||||||||||||||||||| || ||||||||| | ||||||||||||||||
Sbjct: 7 ggatgagcaaagaaagtggtttcttgagatagaatctacttttggtgaagatgctgtgaa 66
>RF00994;mir-1255;AAGU02568188.1/5623-5558 9785:Loxodonta africana
(African savanna elephant)
Length = 66
Score = 71.9 bits (36), Expect = 8e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 1 ggatgagcaaagaaagtggtttcttgcaatggaatctactccttgtgaagatgctgtgaa 60
|||||||| |||||||| |||||||| |||||||||||||| | | ||||||||||||||
Sbjct: 7 ggatgagcgaagaaagtagtttcttgaaatggaatctactcttggcgaagatgctgtgaa 66
>RF00994;mir-1255;AAGU02590879.1/464-529 9785:Loxodonta africana
(African savanna elephant)
Length = 66
Score = 71.9 bits (36), Expect = 8e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 1 ggatgagcaaagaaagtggtttcttgcaatggaatctactccttgtgaagatgctgtgaa 60
||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 7 ggatgagcaaaagaagtggtttcttgagttggaatctactcctggtgaagatgctgtgaa 66
>RF00994;mir-1255;AANG01452839.1/249-184 9685:Felis catus
(domestic cat)
Length = 66
Score = 63.9 bits (32), Expect = 2e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1 ggatgagcaaagaaagtggtttcttgcaatggaatctactccttgtgaagat 52
||||||||||||||||| ||||| || ||||||||||||||| ||||||||
Sbjct: 7 ggatgagcaaagaaagtagtttcctgagatggaatctactcctggtgaagat 58
>RF00994;mir-1255;ABRR01456339.1/1038-1103 30538:Lama pacos
(alpaca)
Length = 66
Score = 56.0 bits (28), Expect = 5e-08
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 1 ggatgagcaaagaaagtggtttcttgcaatggaatctactccttgtgaagatgctgtgaa 60
||||||||||||||||||||||| || |||||| | ||| | ||||||||||||||||
Sbjct: 7 ggatgagcaaagaaagtggtttcctgagatggaaaccacttccagtgaagatgctgtgaa 66
