miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29109_hsa-mir-1261:mirbase
          Length = 82

 Score =  155 bits (78), Expect = 6e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgctgtggataaggctttggcttatggggatattgtggttgatctgttctatccagatga 60
          |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tgctatggataaggctttggcttatggggatattgtggttgatctgttctatccagatga 60

                                
Query: 61 ctgaaactttctccatagcagc 82
          ||||||||||||||||||||||
Sbjct: 61 ctgaaactttctccatagcagc 82




>27290_eca-mir-1261:mirbase
          Length = 85

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 73/85 (85%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                      
Query: 1  tgctgtggataaggctttggcttatggggatattgtggttgatctg---ttctatccaga 57
          |||||||||| ||||||||||||| ||| ||||||||| |||| ||   |||||||||||
Sbjct: 1  tgctgtggattaggctttggcttaagggaatattgtggctgatttgatcttctatccaga 60

                                   
Query: 58 tgactgaaactttctccatagcagc 82
            |||||| ||||||||||| ||||
Sbjct: 61 ccactgaagctttctccatatcagc 85