miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30681_ptr-mir-1263:mirbase
Length = 85
Score = 143 bits (72), Expect = 2e-35
Identities = 81/84 (96%)
Strand = Plus / Plus
Query: 1 ctaccccaaaatatggtaccctggcatactgagtattttaatacgggcatactcagtata 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 ctaccccaaaatatggtaccctggcatactgagtattttaatactggcatactcagtatg 60
Query: 61 ccatagtgccatattttggggtag 84
|||| |||||||||||||||||||
Sbjct: 61 ccatggtgccatattttggggtag 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 1 ctaccccaaaatatggtaccctggcatactgagtat 36
|||||||||||||||| ||| |||||||||||||||
Sbjct: 84 ctaccccaaaatatggcaccatggcatactgagtat 49
>29111_hsa-mir-1263:mirbase
Length = 86
Score = 135 bits (68), Expect = 5e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 1 ctaccccaaaatatggtaccctggcatactgagtattttaatacgggcatactcagtata 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 ctaccccaaaatatggtaccctggcatactgagtattttaatactggcatactcagtatg 60
Query: 61 ccatagtgccatattttggggtag 84
|||| ||||||||||||||||||
Sbjct: 61 ccatgttgccatattttggggtag 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 1 ctaccccaaaatatggtaccctggcatactgagtat 36
|||||||||||||||| | | |||||||||||||||
Sbjct: 84 ctaccccaaaatatggcaacatggcatactgagtat 49
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 49 atactcagtataccatagtgccatattttggggtag 84
||||||||||| ||| || ||||||||||||||||
Sbjct: 36 atactcagtatgccagggtaccatattttggggtag 1
