miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>29112_hsa-mir-1264:mirbase
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 aggtcctcaataagtatttgttgaaagaataaataaaccaacaagtcttatttgagcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggtcctcaataagtatttgttgaaagaataaataaaccaacaagtcttatttgagcacc 60
Query: 61 tgttatgtg 69
|||||||||
Sbjct: 61 tgttatgtg 69
>30682_ptr-mir-1264:mirbase
Length = 68
Score = 135 bits (68), Expect = 4e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 2 ggtcctcaataagtatttgttgaaagaataaataaaccaacaagtcttatttgagcacct 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcctcaataagtatttgttgaaagaataaataaaccaacaagtcttatttgagcacct 60
Query: 62 gttatgtg 69
||||||||
Sbjct: 61 gttatgtg 68
>27291_eca-mir-1264:mirbase
Length = 69
Score = 129 bits (65), Expect = 3e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 aggtcctcaataagtatttgttgaaagaataaataaaccaacaagtcttatttgagcacc 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 aggtcctcaataagtatttgttgaaagaataaatgaaccaacaagtcttatttgagcacc 60
Query: 61 tgttatgtg 69
|||||||||
Sbjct: 61 tgttatgtg 69
>32401_mmu-mir-1264:mirbase
Length = 86
Score = 105 bits (53), Expect = 4e-24
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 aggtcctcaataagtatttgttgaaagaataaataaaccaacaagtcttatttgagcacc 60
|||||||||||||||||||||||||| ||||||| || |||||| |||||||||||||||
Sbjct: 14 aggtcctcaataagtatttgttgaaaaaataaatgaagcaacaaatcttatttgagcacc 73
Query: 61 tgttatgtg 69
|||||||||
Sbjct: 74 tgttatgtg 82
>32400_mmu-mir-1264:mirbase
Length = 86
Score = 105 bits (53), Expect = 4e-24
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 aggtcctcaataagtatttgttgaaagaataaataaaccaacaagtcttatttgagcacc 60
|||||||||||||||||||||||||| ||||||| || |||||| |||||||||||||||
Sbjct: 14 aggtcctcaataagtatttgttgaaaaaataaatgaagcaacaaatcttatttgagcacc 73
Query: 61 tgttatgtg 69
|||||||||
Sbjct: 74 tgttatgtg 82
