miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29113_hsa-mir-1265:mirbase
          Length = 86

 Score =  139 bits (70), Expect = 4e-34
 Identities = 82/86 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  atggtttgggactcaggatgtggtcaagtgttgctaaggcatgttcagtgacaatacttg 60
          ||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||
Sbjct: 1  atggtttgggactcaggatgtggtcaagtgttgttaaggcatgttcaggaacaatacttg 60

                                    
Query: 61 accacattttgaatcccaaaccatat 86
          |||||||||||||| |||||||||||
Sbjct: 61 accacattttgaattccaaaccatat 86




>30683_ptr-mir-1265:mirbase
          Length = 68

 Score =  109 bits (55), Expect = 3e-25
 Identities = 64/67 (95%)
 Strand = Plus / Plus

                                                                      
Query: 3  ggtttgggactcaggatgtggtcaagtgttgctaaggcatgttcagtgacaatacttgac 62
          ||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||
Sbjct: 2  ggtttgggactcaggatgtggtcaagtgttgttaaggcatgttcagcaacaatacttgac 61

                 
Query: 63 cacattt 69
          |||||||
Sbjct: 62 cacattt 68