miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>29115_hsa-mir-1267:mirbase
          Length = 78

 Score = 85.7 bits (43), Expect = 4e-18
 Identities = 71/79 (89%), Gaps = 1/79 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctcccaaatcttctgttgaaatgtaatcaccacctccagcaaacagggattacatttcaa 60
          ||||||||||| |||||||| ||||||| ||||||||||||    |||||||||||||||
Sbjct: 1  ctcccaaatctcctgttgaagtgtaatccccacctccagcattg-gggattacatttcaa 59

                             
Query: 61 catgagatttggataagga 79
          |||||||||||||| ||||
Sbjct: 60 catgagatttggatgagga 78




>30685_ptr-mir-1267:mirbase
          Length = 77

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 67/74 (90%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctcccaaatcttctgttgaaatgtaatcaccacctccagcaaacagggattacatttcaa 60
          ||||||||||| |||||||| ||||||| ||||||||||||    |||||||||||||||
Sbjct: 1  ctcccaaatctcctgttgaagtgtaatccccacctccagcattg-gggattacatttcaa 59

                        
Query: 61 catgagatttggat 74
          ||||||||||||||
Sbjct: 60 catgagatttggat 73