miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30720_ptr-mir-1302-7:mirbase
Length = 71
Score = 77.8 bits (39), Expect = 9e-16
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 15 agtacatgtatgtctggtgcaacaattgggacatacttatgct 57
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 14 agtacatgtatgtctggtgcaataattgggacatacttatgct 56
>29167_hsa-mir-1302-7:mirbase
Length = 72
Score = 71.9 bits (36), Expect = 6e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 18 acatgtatgtctggtgcaacaattgggacatacttatgct 57
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 17 acatgtatgtctggtgcaataattgggacatacttatgct 56
>29164_hsa-mir-1302-4:mirbase
Length = 150
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 32 tgcaacaattgggacatacttatgct 57
||||||| ||||||||||||||||||
Sbjct: 69 tgcaacatttgggacatacttatgct 94
>27300_eca-mir-1302-1:mirbase
Length = 58
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 23 tatgtctggtgcaacaattgggacatacttat 54
||||||| ||||||| |||||||||||||||
Sbjct: 16 tatgtctcatgcaacatttgggacatacttat 47
>27303_eca-mir-1302d-4:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 22 gtatgtctggtgcaacaattgggacatacttatgct 57
|||||||| ||||| | ||||||||||||||||||
Sbjct: 40 gtatgtcttatgcaatatttgggacatacttatgct 75
