miRNEST 2.0, an integrative microRNA resource :: BLAST
>29230_hsa-mir-3074:mirbase
Length = 81
Score = 93.7 bits (47), Expect = 2e-20
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 8 ccctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagca 66
|||||| ||||||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 76 ccctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagca 17
Query: 67 ggaacaggagt 77
|||||||||||
Sbjct: 16 ggaacaggagt 6
>29231_hsa-mir-3074:mirbase
Length = 81
Score = 93.7 bits (47), Expect = 2e-20
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 8 ccctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagca 66
|||||| ||||||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 76 ccctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagca 17
Query: 67 ggaacaggagt 77
|||||||||||
Sbjct: 16 ggaacaggagt 6
>32511_mmu-mir-3074-1:mirbase
Length = 85
Score = 93.7 bits (47), Expect = 2e-20
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 8 ccctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagca 66
|||||| ||||||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 78 ccctccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagca 19
Query: 67 ggaacaggagt 77
|||||||||||
Sbjct: 18 ggaacaggagt 8
>32512_mmu-mir-3074-1:mirbase
Length = 85
Score = 93.7 bits (47), Expect = 2e-20
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 8 ccctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagca 66
|||||| ||||||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 78 ccctccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagca 19
Query: 67 ggaacaggagt 77
|||||||||||
Sbjct: 18 ggaacaggagt 8
>33024_rno-mir-3074:mirbase
Length = 117
Score = 93.7 bits (47), Expect = 2e-20
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 8 ccctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagca 66
|||||| ||||||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 91 ccctccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagca 32
Query: 67 ggaacaggagt 77
|||||||||||
Sbjct: 31 ggaacaggagt 21
>33929_ssc-mir-24-2:mirbase
Length = 80
Score = 93.7 bits (47), Expect = 2e-20
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 8 ccctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagca 66
|||||| ||||||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 7 ccctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagca 66
Query: 67 ggaacaggagt 77
|||||||||||
Sbjct: 67 ggaacaggagt 77
>26639_cfa-mir-24-1:mirbase
Length = 62
Score = 89.7 bits (45), Expect = 3e-19
Identities = 58/61 (95%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 15 gtgcctactgagctgatatcagttctcgttg-acccactggctcagttcagcaggaacag 73
||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||
Sbjct: 2 gtgcctactgagctgatatcagttctcattgtacacactggctcagttcagcaggaacag 61
Query: 74 g 74
|
Sbjct: 62 g 62
>26962_eca-mir-24-2:mirbase
Length = 68
Score = 87.7 bits (44), Expect = 1e-18
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 10 ctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagcagg 68
|||| ||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagg 60
Query: 69 aacaggag 76
||||||||
Sbjct: 61 aacaggag 68
>27667_mml-mir-24-1:mirbase
Length = 68
Score = 87.7 bits (44), Expect = 1e-18
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 10 ctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagcagg 68
|||| ||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagg 60
Query: 69 aacaggag 76
||||||||
Sbjct: 61 aacaggag 68
>28183_mne-mir-24-1:mirbase
Length = 68
Score = 87.7 bits (44), Expect = 1e-18
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 10 ctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagcagg 68
|||| ||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagg 60
Query: 69 aacaggag 76
||||||||
Sbjct: 61 aacaggag 68
>28377_hsa-mir-24-1:mirbase
Length = 68
Score = 87.7 bits (44), Expect = 1e-18
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 10 ctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagcagg 68
|||| ||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagg 60
Query: 69 aacaggag 76
||||||||
Sbjct: 61 aacaggag 68
>30056_ppa-mir-24-1:mirbase
Length = 68
Score = 87.7 bits (44), Expect = 1e-18
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 10 ctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagcagg 68
|||| ||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagg 60
Query: 69 aacaggag 76
||||||||
Sbjct: 61 aacaggag 68
>30768_ppy-mir-24-1:mirbase
Length = 68
Score = 87.7 bits (44), Expect = 1e-18
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 10 ctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagcagg 68
|||| ||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagg 60
Query: 69 aacaggag 76
||||||||
Sbjct: 61 aacaggag 68
>31791_mmu-mir-24-1:mirbase
Length = 68
Score = 87.7 bits (44), Expect = 1e-18
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 10 ctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagcagg 68
|||| ||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagcagg 60
Query: 69 aacaggag 76
||||||||
Sbjct: 61 aacaggag 68
>32675_rno-mir-24-1:mirbase
Length = 68
Score = 87.7 bits (44), Expect = 1e-18
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 10 ctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagcagg 68
|||| ||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcatttcacacactggctcagttcagcagg 60
Query: 69 aacaggag 76
||||||||
Sbjct: 61 aacaggag 68
>33147_bta-mir-24-1:mirbase
Length = 68
Score = 87.7 bits (44), Expect = 1e-18
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 10 ctccagtgcctactgagctgatatcagttctc-gttgacccactggctcagttcagcagg 68
|||| ||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctcattttacacactggctcagttcagcagg 60
Query: 69 aacaggag 76
||||||||
Sbjct: 61 aacaggag 68
>30163_ptr-mir-24-1:mirbase
Length = 67
Score = 85.7 bits (43), Expect = 5e-18
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 15 gtgcctactgagctgatatcagttctcgttg-acccactggctcagttcagcaggaacag 73
||||||||||||||||||||||||||| || || |||||||||||||||||||||||||
Sbjct: 5 gtgcctactgagctgatatcagttctcattttacacactggctcagttcagcaggaacag 64
Query: 74 gag 76
|||
Sbjct: 65 gag 67
>25716_xtr-mir-24a:mirbase
Length = 67
Score = 83.8 bits (42), Expect = 2e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 15 gtgcctactgagctgatatcagttctcgttgacccactggctcagttcagcaggaacagg 74
||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||
Sbjct: 6 gtgcctactgaactgatatcagttctatttcacacactggctcagttcagcaggaacagg 65
Query: 75 ag 76
||
Sbjct: 66 ag 67
>25717_xtr-mir-24a:mirbase
Length = 67
Score = 83.8 bits (42), Expect = 2e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 15 gtgcctactgagctgatatcagttctcgttgacccactggctcagttcagcaggaacagg 74
||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||
Sbjct: 6 gtgcctactgaactgatatcagttctatttcacacactggctcagttcagcaggaacagg 65
Query: 75 ag 76
||
Sbjct: 66 ag 67
>26413_tgu-mir-24:mirbase
Length = 132
Score = 83.8 bits (42), Expect = 2e-17
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 9 cctccagtgcctactgagctgatatcagttctcgttg-acccactggctcagttcagcag 67
||||| |||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 57 cctccggtgcctactgagctgatatcagttctgattttacacactggctcagttcagcag 116
Query: 68 gaacaggagt 77
||||||||||
Sbjct: 117 gaacaggagt 126
>25908_gga-mir-24:mirbase
Length = 68
Score = 71.9 bits (36), Expect = 7e-14
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 10 ctccagtgcctactgagctgatatcagttct-cgttgacccactggctcagttcagcagg 68
|||| |||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 1 ctccggtgcctactgagctgatatcagttctgattttacatactggctcagttcagcagg 60
Query: 69 aacaggag 76
||||||||
Sbjct: 61 aacaggag 68
>34228_dre-mir-24-1:mirbase
Length = 80
Score = 67.9 bits (34), Expect = 1e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 10 ctccagtgcctactgagctgatatcagttctcgttgacccactggctcagttcagcagga 69
|||| |||||| ||||||||||||||||| | || | | ||||||||||||||||||||
Sbjct: 8 ctccggtgccttctgagctgatatcagttgtagtaaatc-actggctcagttcagcagga 66
Query: 70 acaggagtgcggcc 83
||||||||| ||||
Sbjct: 67 acaggagtgtggcc 80
>34709_tni-mir-24-1:mirbase
Length = 70
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 48 ccactggctcagttcagcaggaacaggagt 77
||||||||||||||||||||||||||||||
Sbjct: 40 ccactggctcagttcagcaggaacaggagt 69
>31792_mmu-mir-24-2:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 49 cactggctcagttcagcaggaacaggagt 77
|||||||||||||||||||||||||||||
Sbjct: 58 cactggctcagttcagcaggaacaggagt 86
>32513_mmu-mir-3074-2:mirbase
Length = 83
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 49 cactggctcagttcagcaggaacaggagt 77
|||||||||||||||||||||||||||||
Sbjct: 36 cactggctcagttcagcaggaacaggagt 8
>32514_mmu-mir-3074-2:mirbase
Length = 83
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 49 cactggctcagttcagcaggaacaggagt 77
|||||||||||||||||||||||||||||
Sbjct: 36 cactggctcagttcagcaggaacaggagt 8
>32676_rno-mir-24-2:mirbase
Length = 108
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 49 cactggctcagttcagcaggaacaggagt 77
|||||||||||||||||||||||||||||
Sbjct: 58 cactggctcagttcagcaggaacaggagt 86
>34230_dre-mir-24-3:mirbase
Length = 142
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 49 cactggctcagttcagcaggaacaggagt 77
|||||||||||||||||||||||||||||
Sbjct: 77 cactggctcagttcagcaggaacaggagt 105
>27345_mdo-mir-24-1:mirbase
Length = 57
Score = 56.0 bits (28), Expect = 4e-09
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 15 gtgcctactgagctgatatcagttct-cgttgacccactggctcagttcagcagga 69
|||||||||||||||||| ||||||| || || |||||||||||||||||||||
Sbjct: 2 gtgcctactgagctgataacagttctgattttacacactggctcagttcagcagga 57
>27346_mdo-mir-24-2:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 50 actggctcagttcagcaggaacaggagt 77
||||||||||||||||||||||||||||
Sbjct: 44 actggctcagttcagcaggaacaggagt 71
>34561_fru-mir-24-1:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 50 actggctcagttcagcaggaacaggagt 77
||||||||||||||||||||||||||||
Sbjct: 52 actggctcagttcagcaggaacaggagt 79
>34562_fru-mir-24-1:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 50 actggctcagttcagcaggaacaggagt 77
||||||||||||||||||||||||||||
Sbjct: 52 actggctcagttcagcaggaacaggagt 79
>26961_eca-mir-24:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 50 actggctcagttcagcaggaacaggag 76
|||||||||||||||||||||||||||
Sbjct: 42 actggctcagttcagcaggaacaggag 68
>27668_mml-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 49 cactggctcagttcagcaggaacagga 75
|||||||||||||||||||||||||||
Sbjct: 47 cactggctcagttcagcaggaacagga 73
>28184_mne-mir-24-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 49 cactggctcagttcagcaggaacagga 75
|||||||||||||||||||||||||||
Sbjct: 47 cactggctcagttcagcaggaacagga 73
>28270_ggo-mir-24:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 cactggctcagttcagcaggaacagg 74
||||||||||||||||||||||||||
Sbjct: 47 cactggctcagttcagcaggaacagg 72
>28378_hsa-mir-24-2:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 cactggctcagttcagcaggaacagg 74
||||||||||||||||||||||||||
Sbjct: 47 cactggctcagttcagcaggaacagg 72
>30057_ppa-mir-24-2:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 cactggctcagttcagcaggaacagg 74
||||||||||||||||||||||||||
Sbjct: 47 cactggctcagttcagcaggaacagg 72
>30164_ptr-mir-24-2:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 cactggctcagttcagcaggaacagg 74
||||||||||||||||||||||||||
Sbjct: 47 cactggctcagttcagcaggaacagg 72
>30769_ppy-mir-24-2:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 cactggctcagttcagcaggaacagg 74
||||||||||||||||||||||||||
Sbjct: 47 cactggctcagttcagcaggaacagg 72
>33148_bta-mir-24-2:mirbase
Length = 72
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 cactggctcagttcagcaggaacagg 74
||||||||||||||||||||||||||
Sbjct: 47 cactggctcagttcagcaggaacagg 72
>25444_pma-mir-24:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 49 cactggctcagttcagcaggaacag 73
|||||||||||||||||||||||||
Sbjct: 55 cactggctcagttcagcaggaacag 79
>26640_cfa-mir-24-2:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 50 actggctcagttcagcaggaacagg 74
|||||||||||||||||||||||||
Sbjct: 38 actggctcagttcagcaggaacagg 62
>33928_ssc-mir-24-1:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 50 actggctcagttcagcaggaacagg 74
|||||||||||||||||||||||||
Sbjct: 48 actggctcagttcagcaggaacagg 72
>34229_dre-mir-24-2:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 50 actggctcagttcagcaggaacagg 74
|||||||||||||||||||||||||
Sbjct: 49 actggctcagttcagcaggaacagg 73
>34231_dre-mir-24-4:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 51 ctggctcagttcagcaggaacagg 74
||||||||||||||||||||||||
Sbjct: 55 ctggctcagttcagcaggaacagg 78
>34563_fru-mir-24-2:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 51 ctggctcagttcagcaggaacagg 74
||||||||||||||||||||||||
Sbjct: 50 ctggctcagttcagcaggaacagg 73
>34710_tni-mir-24-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 51 ctggctcagttcagcaggaacagg 74
||||||||||||||||||||||||
Sbjct: 50 ctggctcagttcagcaggaacagg 73
>25660_xla-mir-24b:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 ctggctcagttcagcagga 69
|||||||||||||||||||
Sbjct: 44 ctggctcagttcagcagga 62
>25718_xtr-mir-24b:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 ctggctcagttcagcagga 69
|||||||||||||||||||
Sbjct: 44 ctggctcagttcagcagga 62
