miRNEST 2.0, an integrative microRNA resource :: BLAST
>27783_mml-mir-192:mirbase
Length = 110
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 6 gcacagggctctgacctatgaattgacagccagttctctc-tgacccctctggctgccaa 64
|||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct: 14 gcacagggctctgacctatgaattgacagccagtgctctcgtctcccctctggctgccaa 73
Query: 65 ttccataggtcacaggtatgttcgcct 91
|||||||||||||||||||||||||||
Sbjct: 74 ttccataggtcacaggtatgttcgcct 100
>28500_hsa-mir-192:mirbase
Length = 110
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 6 gcacagggctctgacctatgaattgacagccagttctctc-tgacccctctggctgccaa 64
|||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct: 14 gcacagggctctgacctatgaattgacagccagtgctctcgtctcccctctggctgccaa 73
Query: 65 ttccataggtcacaggtatgttcgcct 91
|||||||||||||||||||||||||||
Sbjct: 74 ttccataggtcacaggtatgttcgcct 100
>30266_ptr-mir-192:mirbase
Length = 109
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 6 gcacagggctctgacctatgaattgacagccagttctctc-tgacccctctggctgccaa 64
|||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct: 14 gcacagggctctgacctatgaattgacagccagtgctctcgtctcccctctggctgccaa 73
Query: 65 ttccataggtcacaggtatgttcgcct 91
|||||||||||||||||||||||||||
Sbjct: 74 ttccataggtcacaggtatgttcgcct 100
>30881_ppy-mir-192:mirbase
Length = 110
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 6 gcacagggctctgacctatgaattgacagccagttctctc-tgacccctctggctgccaa 64
|||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct: 14 gcacagggctctgacctatgaattgacagccagtgctctcgtctcccctctggctgccaa 73
Query: 65 ttccataggtcacaggtatgttcgcct 91
|||||||||||||||||||||||||||
Sbjct: 74 ttccataggtcacaggtatgttcgcct 100
>33260_bta-mir-192:mirbase
Length = 106
Score = 133 bits (67), Expect = 2e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 6 gcacagggctctgacctatgaattgacagccagttctctc-tgacccctctggctgccaa 64
|||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||
Sbjct: 10 gcacagggctctgacctatgaattgacagccagtgctcttgtgtcccctctggctgccaa 69
Query: 65 ttccataggtcacaggtatgttcgcct 91
|||||||||||||||||||||||||||
Sbjct: 70 ttccataggtcacaggtatgttcgcct 96
>34020_ssc-mir-192:mirbase
Length = 80
Score = 119 bits (60), Expect = 4e-28
Identities = 76/80 (95%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 6 gcacagggctctgacctatgaattgacagccagttctctc-tgacccctctggctgccaa 64
|||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct: 1 gcacagggctctgacctatgaattgacagccagtgctctcatctcccctctggctgccaa 60
Query: 65 ttccataggtcacaggtatg 84
||||||||||||||||||||
Sbjct: 61 ttccataggtcacaggtatg 80
>31909_mmu-mir-192:mirbase
Length = 89
Score = 109 bits (55), Expect = 3e-25
Identities = 77/83 (92%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 6 gcacagggctctgacctatgaattgacagccagttctctctgacc-cctctggctgccaa 64
|||||||||||||||||||||||||||||||||| |||| | | ||||||||||||||
Sbjct: 4 gcacagggctctgacctatgaattgacagccagtactcttttctctcctctggctgccaa 63
Query: 65 ttccataggtcacaggtatgttc 87
|||||||||||||||||||||||
Sbjct: 64 ttccataggtcacaggtatgttc 86
>32778_rno-mir-192:mirbase
Length = 110
Score = 109 bits (55), Expect = 3e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 6 gcacagggctctgacctatgaattgacagccagttctctc-tgacccctctggctgccaa 64
|||||||||||||||||||||||||||||||||| |||| | | |||||||||||||
Sbjct: 14 gcacagggctctgacctatgaattgacagccagtactctgatctcgcctctggctgccag 73
Query: 65 ttccataggtcacaggtatgttcgcct 91
|||||||||||||||||||||||||||
Sbjct: 74 ttccataggtcacaggtatgttcgcct 100
>26747_cfa-mir-192:mirbase
Length = 65
Score = 81.8 bits (41), Expect = 8e-17
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 16 ctgacctatgaattgacagccagttctctc-tgacccctctggctgccaattccataggt 74
|||||||||||||||||||||||| ||||| | | ||||||||||||||||||||||||
Sbjct: 1 ctgacctatgaattgacagccagtgctctcatctctcctctggctgccaattccataggt 60
Query: 75 cacag 79
|||||
Sbjct: 61 cacag 65
>27073_eca-mir-192:mirbase
Length = 61
Score = 75.8 bits (38), Expect = 5e-15
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 16 ctgacctatgaattgacagccagttctctctgac-ccctctggctgccaattccataggt 74
|||||||||||||||||||||||| |||| || | |||||||||||||||||||||||||
Sbjct: 1 ctgacctatgaattgacagccagtgctct-tgtctccctctggctgccaattccataggt 59
Query: 75 ca 76
||
Sbjct: 60 ca 61
>25812_xtr-mir-192:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tgacctatgaattgacagccagt 39
|||||||||||||||||||||||
Sbjct: 16 tgacctatgaattgacagccagt 38
>34340_dre-mir-192:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tgacctatgaattgacagccagt 39
|||||||||||||||||||||||
Sbjct: 17 tgacctatgaattgacagccagt 39
>34619_fru-mir-192:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tgacctatgaattgacagccagt 39
|||||||||||||||||||||||
Sbjct: 16 tgacctatgaattgacagccagt 38
>34766_tni-mir-192:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tgacctatgaattgacagccagt 39
|||||||||||||||||||||||
Sbjct: 11 tgacctatgaattgacagccagt 33
>25512_pma-mir-192:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 tgacctatgaattgacagcc 36
||||||||||||||||||||
Sbjct: 16 tgacctatgaattgacagcc 35
