miRNEST 2.0, an integrative microRNA resource :: BLAST
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 97.6 bits (49), Expect = 2e-21
Identities = 86/97 (88%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 10 tatatgcctggctccctgtatgccatttccagagcccaccagtatcaccggtgacctccg 69
|||||||||||||||||||||||||||| ||||||||||| | | || || || ||| ||
Sbjct: 7 tatatgcctggctccctgtatgccatttgcagagcccaccggca-catcgatggccttcg 65
Query: 70 tgaatggcgtatgaggagccaagcatattccccatct 106
|| |||||||||||||||||| |||||| ||||||||
Sbjct: 66 tggatggcgtatgaggagccatgcatatgccccatct 102
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 91.7 bits (46), Expect = 1e-19
Identities = 77/86 (89%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgccatttccagagcccaccagtatcaccggtgacctccgtgaa 73
|||||||||||||||||||||||| ||||||||||| || || || || |||||||| |
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaccggt-tcttcgatggcctccgtgga 69
Query: 74 tggcgtatgaggagccaagcatattc 99
||||||||||||||||| ||||||||
Sbjct: 70 tggcgtatgaggagccatgcatattc 95
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 83.8 bits (42), Expect = 2e-17
Identities = 76/86 (88%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgccatttccagagcccaccagtatcaccggtgacctccgtgaa 73
|||||||||||||||||||||||| ||||||||| | | ||| || || |||||||| |
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaac-ggatcctcgatggcctccgtgga 69
Query: 74 tggcgtatgaggagccaagcatattc 99
||||||||||||||||| ||||||||
Sbjct: 70 tggcgtatgaggagccatgcatattc 95
>41219_csi-MIR160:mirbase
Length = 143
Score = 73.8 bits (37), Expect = 2e-14
Identities = 83/97 (85%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 4 tataagtatatgcctggctccctgtatgccatttccagagcccaccagtatcaccggtga 63
||||| ||| |||||||||||||||||||||||| ||||| | | | | | || || ||
Sbjct: 23 tataattatgtgcctggctccctgtatgccatttgcagagtcaatc-gaaacatcgatgg 81
Query: 64 cctccgtgaatggcgtatgaggagccaagcatattcc 100
|||||||| |||||||||||||||||| |||||||||
Sbjct: 82 cctccgtggatggcgtatgaggagccatgcatattcc 118
>40019_ath-MIR160a:mirbase
Length = 85
Score = 73.8 bits (37), Expect = 2e-14
Identities = 76/87 (87%), Gaps = 4/87 (4%)
Strand = Plus / Plus
Query: 12 tatgcctggctccctgtatgccatttccagagcccacc-agtatcaccggtgacctccgt 70
|||||||||||||||||||||||| | | ||||||| | |||||| | ||||||||||
Sbjct: 2 tatgcctggctccctgtatgccatatgctgagcccatcgagtatc---gatgacctccgt 58
Query: 71 gaatggcgtatgaggagccaagcatat 97
| |||||||||||||||||| ||||||
Sbjct: 59 ggatggcgtatgaggagccatgcatat 85
>40312_bra-MIR160a:mirbase
Length = 127
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 61 tgacctccgtgaatggcgtatgaggagccaagcatatt 98
|||||||||||||||||||||||||||||| |||||||
Sbjct: 71 tgacctccgtgaatggcgtatgaggagccatgcatatt 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tatgcctggctccctgtatgccat 35
||||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgccat 47
>39807_aly-MIR160a:mirbase
Length = 158
Score = 65.9 bits (33), Expect = 6e-12
Identities = 75/87 (86%), Gaps = 4/87 (4%)
Strand = Plus / Plus
Query: 12 tatgcctggctccctgtatgccatttccagagcccacc-agtatcaccggtgacctccgt 70
|||||||||||||||||||||||| | | |||| || | |||||| | ||||||||||
Sbjct: 40 tatgcctggctccctgtatgccatatgctgagctcatcgagtatc---gatgacctccgt 96
Query: 71 gaatggcgtatgaggagccaagcatat 97
| |||||||||||||||||| ||||||
Sbjct: 97 ggatggcgtatgaggagccatgcatat 123
>41529_sly-MIR160a:mirbase
Length = 129
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 70 tgaatggcgtatgaggagccaagcatattcc 100
|||||||||||||||||||||||||||||||
Sbjct: 78 tgaatggcgtatgaggagccaagcatattcc 108
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 9 gtatatgcctggctccctgtatgccattt 37
|||||||||||||||||||||||||||||
Sbjct: 15 gtatatgcctggctccctgtatgccattt 43
>40436_gma-MIR160:mirbase
Length = 119
Score = 60.0 bits (30), Expect = 3e-10
Identities = 76/90 (84%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 9 gtatatgcctggctccctgtatgccatttccagagcccaccagtatcaccggtgacctcc 68
|||| |||||||||||||||||||||||| ||||| || | | | || | ||||||
Sbjct: 16 gtatgtgcctggctccctgtatgccatttgtagagctcatc-gaagcatcaatgaccttt 74
Query: 69 gtgaatggcgtatgaggagccaagcatatt 98
||| ||||||||||||||||||||||||||
Sbjct: 75 gtggatggcgtatgaggagccaagcatatt 104
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 12 tatgcctggctccctgtatgccatttccagagccca 47
|||||||||||||||||||||||||| || ||||||
Sbjct: 19 tatgcctggctccctgtatgccatttgcaaagccca 54
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 73 atggcgtatgaggagccaagcatattcc 100
||||||||||||||||||||||||||||
Sbjct: 64 atggcgtatgaggagccaagcatattcc 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gtatatgcctggctccctgtatgccat 35
|||| ||||||||||||||||||||||
Sbjct: 1 gtatgtgcctggctccctgtatgccat 27
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 73 atggcgtatgaggagccaagcatattcc 100
||||||||||||||||||||||||||||
Sbjct: 64 atggcgtatgaggagccaagcatattcc 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 9 gtatatgcctggctccctgtatgccat 35
|||| ||||||||||||||||||||||
Sbjct: 1 gtatgtgcctggctccctgtatgccat 27
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 atgcctggctccctgtatgccattt 37
|||||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgccattt 34
>42705_zma-MIR160e:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 atatgcctggctccctgtatgcca 34
||||||||||||||||||||||||
Sbjct: 6 atatgcctggctccctgtatgcca 29
>42704_zma-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 atatgcctggctccctgtatgcca 34
||||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcca 41
>42636_tae-MIR160:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 atatgcctggctccctgtatgcca 34
||||||||||||||||||||||||
Sbjct: 19 atatgcctggctccctgtatgcca 42
>41926_osa-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 atatgcctggctccctgtatgcca 34
||||||||||||||||||||||||
Sbjct: 5 atatgcctggctccctgtatgcca 28
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 atatgcctggctccctgtatgcca 34
||||||||||||||||||||||||
Sbjct: 29 atatgcctggctccctgtatgcca 52
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgccattt 37
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccattt 24
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgccattt 37
||||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccattt 29
>40658_mtr-MIR160:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgccattt 37
||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccattt 44
>40339_rco-MIR160a:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgccattt 37
||||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccattt 29
>42706_zma-MIR160f:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atatgcctggctccctgtatgcc 33
|||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcc 40
>41927_osa-MIR160e:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atatgcctggctccctgtatgcc 33
|||||||||||||||||||||||
Sbjct: 8 atatgcctggctccctgtatgcc 30
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tatgcctggctccctgtatgcca 34
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tatgcctggctccctgtatgcca 34
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>40340_rco-MIR160b:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tatgcctggctccctgtatgcca 34
|||||||||||||||||||||||
Sbjct: 4 tatgcctggctccctgtatgcca 26
>40021_ath-MIR160c:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tatgcctggctccctgtatgcca 34
|||||||||||||||||||||||
Sbjct: 3 tatgcctggctccctgtatgcca 25
>39809_aly-MIR160c:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tatgcctggctccctgtatgcca 34
|||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgcca 44
>42707_zma-MIR160g:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 atgcctggctccctgtatgcca 34
||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgcca 22
>41869_far-MIR160:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 atgcctggctccctgtatgcca 34
||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgcca 73
>39731_smo-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgccat 35
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>39375_pab-MIR160b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgccat 35
||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41
>42703_zma-MIR160c:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>42702_zma-MIR160b:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>42701_zma-MIR160a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30
>42677_ttu-MIR160:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41925_osa-MIR160c:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>41924_osa-MIR160b:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>41923_osa-MIR160a:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>40020_ath-MIR160b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>39808_aly-MIR160b:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>39732_smo-MIR160b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39374_pab-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 tgcctggctccctgtatgcca 34
|||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgcca 34
