miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32679_rno-mir-26b:mirbase
Length = 85
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 tgcccgggacccagttcaagtaattcaggataggttgtggtgctgaccagcctgttctcc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 tgcccgggacccagttcaagtaattcaggataggttgtggtgctggccagcctgttctcc 60
Query: 61 attacttggctcgggggccggtgcc 85
|||||||||||||||||||||||||
Sbjct: 61 attacttggctcgggggccggtgcc 85
>33152_bta-mir-26b:mirbase
Length = 85
Score = 145 bits (73), Expect = 6e-36
Identities = 83/85 (97%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 1 tgcccgggacccagttcaagtaattcaggataggttgtggtgctgaccagcctgttctcc 60
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 1 tgcccgggacccagttcaagtaattcaggataggttgtg-tgctgtccagcctgttctcc 59
Query: 61 attacttggctcgggggccggtgcc 85
|||||||||||||||||||||||||
Sbjct: 60 attacttggctcgggggccggtgcc 84
>27672_mml-mir-26b:mirbase
Length = 77
Score = 123 bits (62), Expect = 2e-29
Identities = 75/78 (96%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 4 ccgggacccagttcaagtaattcaggataggttgtggtgctgaccagcctgttctccatt 63
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 1 ccgggacccagttcaagtaattcaggataggttgt-gtgctgtccagcctgttctccatt 59
Query: 64 acttggctcgggggccgg 81
||||||||||||| ||||
Sbjct: 60 acttggctcggggaccgg 77
>28382_hsa-mir-26b:mirbase
Length = 77
Score = 123 bits (62), Expect = 2e-29
Identities = 75/78 (96%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 4 ccgggacccagttcaagtaattcaggataggttgtggtgctgaccagcctgttctccatt 63
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 1 ccgggacccagttcaagtaattcaggataggttgt-gtgctgtccagcctgttctccatt 59
Query: 64 acttggctcgggggccgg 81
||||||||||||| ||||
Sbjct: 60 acttggctcggggaccgg 77
>30773_ppy-mir-26b:mirbase
Length = 77
Score = 123 bits (62), Expect = 2e-29
Identities = 75/78 (96%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 4 ccgggacccagttcaagtaattcaggataggttgtggtgctgaccagcctgttctccatt 63
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 1 ccgggacccagttcaagtaattcaggataggttgt-gtgctgtccagcctgttctccatt 59
Query: 64 acttggctcgggggccgg 81
||||||||||||| ||||
Sbjct: 60 acttggctcggggaccgg 77
>30168_ptr-mir-26b:mirbase
Length = 76
Score = 121 bits (61), Expect = 8e-29
Identities = 74/77 (96%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 5 cgggacccagttcaagtaattcaggataggttgtggtgctgaccagcctgttctccatta 64
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 1 cgggacccagttcaagtaattcaggataggttgt-gtgctgtccagcctgttctccatta 59
Query: 65 cttggctcgggggccgg 81
|||||||||||| ||||
Sbjct: 60 cttggctcggggaccgg 76
>26644_cfa-mir-26b:mirbase
Length = 56
Score = 89.7 bits (45), Expect = 3e-19
Identities = 55/57 (96%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 15 ttcaagtaattcaggataggttgtggtgctgaccagcctgttctccattacttggct 71
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 1 ttcaagtaattcaggataggttgtg-tgctgtccagcctgttctccattacttggct 56
>27349_mdo-mir-26-2:mirbase
Length = 68
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 48 cagcctgttctccattacttggctcgggggcc 79
|||||||||||||||||||||| |||||||||
Sbjct: 37 cagcctgttctccattacttggttcgggggcc 68
>25447_pma-mir-26a-2:mirbase
Length = 91
Score = 38.2 bits (19), Expect = 0.001
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 9 acccagttcaagtaattcaggataggttgtg 39
|||| ||||||||||| ||||||||| ||||
Sbjct: 13 accctgttcaagtaatccaggataggctgtg 43
>25448_pma-mir-26b:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 15 ttcaagtaattcaggataggttg 37
|||||||||| ||||||||||||
Sbjct: 16 ttcaagtaatccaggataggttg 38
>34236_dre-mir-26b:mirbase
Length = 97
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 14 gttcaagtaattcaggataggtt 36
||||||||||| |||||||||||
Sbjct: 19 gttcaagtaatccaggataggtt 41
