miRNEST 2.0, an integrative microRNA resource :: BLAST
>27674_mml-mir-27b:mirbase
Length = 97
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 72
Query: 61 aagttctgcacct 73
|||||||||||||
Sbjct: 73 aagttctgcacct 85
>28384_hsa-mir-27b:mirbase
Length = 97
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 72
Query: 61 aagttctgcacct 73
|||||||||||||
Sbjct: 73 aagttctgcacct 85
>30170_ptr-mir-27b:mirbase
Length = 96
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 71
Query: 61 aagttctgcacct 73
|||||||||||||
Sbjct: 72 aagttctgcacct 84
>30775_ppy-mir-27b:mirbase
Length = 97
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 72
Query: 61 aagttctgcacct 73
|||||||||||||
Sbjct: 73 aagttctgcacct 85
>32681_rno-mir-27b:mirbase
Length = 97
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 72
Query: 61 aagttctgcacct 73
|||||||||||||
Sbjct: 73 aagttctgcacct 85
>26967_eca-mir-27b:mirbase
Length = 73
Score = 137 bits (69), Expect = 1e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 aggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggct 60
Query: 61 aagttctgcacct 73
|||||||||||||
Sbjct: 61 aagttctgcacct 73
>33156_bta-mir-27b:mirbase
Length = 97
Score = 137 bits (69), Expect = 1e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggct 72
Query: 61 aagttctgcacct 73
|||||||||||||
Sbjct: 73 aagttctgcacct 85
>33932_ssc-mir-27b:mirbase
Length = 80
Score = 137 bits (69), Expect = 1e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4 aggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggct 63
Query: 61 aagttctgcacct 73
|||||||||||||
Sbjct: 64 aagttctgcacct 76
>26416_tgu-mir-27:mirbase
Length = 91
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgattgttttcctctttgttcacagtggct 72
Query: 61 aagttctgcacct 73
|||||||||||||
Sbjct: 73 aagttctgcacct 85
>25724_xtr-mir-27b:mirbase
Length = 96
Score = 121 bits (61), Expect = 7e-29
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
|||||||||||||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 72
Query: 61 aagttctgcacct 73
|||||||||||||
Sbjct: 73 aagttctgcacct 85
>25910_gga-mir-27b:mirbase
Length = 97
Score = 121 bits (61), Expect = 7e-29
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
|||||||||||||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgattgtttccctctttgttcacagtggct 72
Query: 61 aagttctgcacct 73
|||||||||||||
Sbjct: 73 aagttctgcacct 85
>34566_fru-mir-27b:mirbase
Length = 74
Score = 119 bits (60), Expect = 3e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 6 cagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagtt 65
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 6 cagagcttagctgattggtgaacagtgattgatttcctctttgttcacagtggctaagtt 65
Query: 66 ctgcacct 73
||||||||
Sbjct: 66 ctgcacct 73
>34713_tni-mir-27b:mirbase
Length = 74
Score = 119 bits (60), Expect = 3e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 6 cagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagtt 65
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 6 cagagcttagctgattggtgaacagtgattgatttcctctttgttcacagtggctaagtt 65
Query: 66 ctgcacct 73
||||||||
Sbjct: 66 ctgcacct 73
>26646_cfa-mir-27b:mirbase
Length = 63
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 7 agagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagttc 66
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
Query: 67 tgc 69
|||
Sbjct: 61 tgc 63
>27352_mdo-mir-27b:mirbase
Length = 97
Score = 105 bits (53), Expect = 4e-24
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
|||||||||||||||| |||||||||||||| | || ||||| |||||||||||||||||
Sbjct: 13 aggtgcagagcttagccgattggtgaacagtcactgatttcctctttgttcacagtggct 72
Query: 61 aagttctgcacct 73
|||||||||||||
Sbjct: 73 aagttctgcacct 85
>31445_oan-mir-27b:mirbase
Length = 117
Score = 89.7 bits (45), Expect = 2e-19
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 5 gcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggctaagt 64
|||||||||||||||||||||||||||||||| | | |||||||||||||||||||||
Sbjct: 28 gcagagcttagctgattggtgaacagtgattgctggactctttgttcacagtggctaagt 87
Query: 65 tctgc 69
|||||
Sbjct: 88 tctgc 92
>34238_dre-mir-27b:mirbase
Length = 91
Score = 87.7 bits (44), Expect = 1e-18
Identities = 64/70 (91%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 1 aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 12 aggtgcagagcttagctgattggtgaacagtgattg---aactctttgttcacagtggct 68
Query: 61 aagttctgca 70
||||||||||
Sbjct: 69 aagttctgca 78
>25450_pma-mir-27b:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgca 70
||||||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttctgca 70
>34240_dre-mir-27d:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 45 tttgttcacagtggctaagttctgcacc 72
||||||||||||||||||||||| ||||
Sbjct: 53 tttgttcacagtggctaagttcttcacc 80
>25449_pma-mir-27a:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 ttgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 47 ttgttcacagtggctaagttc 67
>34568_fru-mir-27e:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 ttgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 57 ttgttcacagtggctaagttc 77
>34715_tni-mir-27e:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 46 ttgttcacagtggctaagttc 66
|||||||||||||||||||||
Sbjct: 57 ttgttcacagtggctaagttc 77
>25723_xtr-mir-27a:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>25725_xtr-mir-27c-1:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>25726_xtr-mir-27c-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>26645_cfa-mir-27a:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 39 tgttcacagtggctaagttc 58
>26966_eca-mir-27a:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27351_mdo-mir-27a:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>27491_age-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27599_sla-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27673_mml-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28187_mne-mir-27a:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28273_ggo-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28383_hsa-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30060_ppa-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30169_ptr-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30774_ppy-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>31404_lca-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>31444_oan-mir-27a:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 51 tgttcacagtggctaagttc 70
>31797_mmu-mir-27a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>32680_rno-mir-27a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>33154_bta-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>33155_bta-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>33931_ssc-mir-27a:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>34237_dre-mir-27a:mirbase
Length = 131
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 77 tgttcacagtggctaagttc 96
>34241_dre-mir-27e:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttc 66
||||||||||||||||||||
Sbjct: 63 tgttcacagtggctaagttc 82
>34239_dre-mir-27c:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgc 69
|||||||||||| ||||||||||
Sbjct: 54 tgttcacagtggttaagttctgc 76
>34567_fru-mir-27c:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgc 69
|||||||||||| ||||||||||
Sbjct: 52 tgttcacagtggttaagttctgc 74
>34714_tni-mir-27c:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 47 tgttcacagtggctaagttctgc 69
|||||||||||| ||||||||||
Sbjct: 50 tgttcacagtggttaagttctgc 72
