miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00051;mir-17;ABRP01096430.1/2803-2886 132908:Pteropus vampyrus
(large flying fox)
Length = 84
Score = 139 bits (70), Expect = 6e-33
Identities = 79/82 (96%)
Strand = Plus / Plus
Query: 1 cctgctgggactaaagtgctgacagtgcagatagtggtcctctctgtgctaccgcactgt 60
||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 2 cctgctggggctaaagtgctgacagtgcagatagtgatcctctccgtgctaccgcactgt 61
Query: 61 gggtacttgctgctccagcagg 82
||||||||||||||||||||||
Sbjct: 62 gggtacttgctgctccagcagg 83
>RF00051;mir-17;ABRQ01185186.1/4173-4256 9813:Procavia capensis
(cape rock hyrax)
Length = 84
Score = 121 bits (61), Expect = 1e-27
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 12 taaagtgctgacagtgcagatagtggtcctctctgtgctaccgcactgtgggtacttgct 71
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 13 taaagtgctgacagtgcagatagtggtcctctgtgtgctaccgcactgtgggtacttgct 72
Query: 72 gctcc 76
|||||
Sbjct: 73 gctcc 77
>RF00051;mir-17;AAEX02011501.1/32111-32192 9615:Canis lupus
familiaris (dog)
Length = 82
Score = 97.6 bits (49), Expect = 2e-20
Identities = 67/72 (93%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 11 ctaaagtgctgacagtgcagatagtggtcctctctgtgctaccgcactgtgggtacttgc 70
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 12 ctaaagtgctgacagtgcagatagcggtcctcc--gtgctaccgcactgtgggtacttgc 69
Query: 71 tgctccagcagg 82
|||||| |||||
Sbjct: 70 tgctccggcagg 81
