miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>32728_rno-mir-128-2:mirbase
          Length = 84

 Score =  151 bits (76), Expect = 8e-38
 Identities = 76/76 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5  cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 64

                          
Query: 61 gtctctttccctactg 76
          ||||||||||||||||
Sbjct: 65 gtctctttccctactg 80




>27016_eca-mir-128:mirbase
          Length = 84

 Score =  143 bits (72), Expect = 2e-35
 Identities = 75/76 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
          |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5  cagtgggaaggggggccgatgcactgtacgagagtgagtagcaggtctcacagtgaaccg 64

                          
Query: 61 gtctctttccctactg 76
          ||||||||||||||||
Sbjct: 65 gtctctttccctactg 80




>27724_mml-mir-128b:mirbase
          Length = 84

 Score =  135 bits (68), Expect = 5e-33
 Identities = 74/76 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
          |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 5  cagtgggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccg 64

                          
Query: 61 gtctctttccctactg 76
          ||||||||||||||||
Sbjct: 65 gtctctttccctactg 80




>28438_hsa-mir-128-2:mirbase
          Length = 84

 Score =  135 bits (68), Expect = 5e-33
 Identities = 74/76 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
          |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 5  cagtgggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccg 64

                          
Query: 61 gtctctttccctactg 76
          ||||||||||||||||
Sbjct: 65 gtctctttccctactg 80




>30215_ptr-mir-128-2:mirbase
          Length = 83

 Score =  135 bits (68), Expect = 5e-33
 Identities = 74/76 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
          |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 4  cagtgggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccg 63

                          
Query: 61 gtctctttccctactg 76
          ||||||||||||||||
Sbjct: 64 gtctctttccctactg 79




>30824_ppy-mir-128-2:mirbase
          Length = 84

 Score =  135 bits (68), Expect = 5e-33
 Identities = 74/76 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
          |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 5  cagtgggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccg 64

                          
Query: 61 gtctctttccctactg 76
          ||||||||||||||||
Sbjct: 65 gtctctttccctactg 80




>33207_bta-mir-128-2:mirbase
          Length = 84

 Score =  127 bits (64), Expect = 1e-30
 Identities = 73/76 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
          ||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||
Sbjct: 5  cagtgggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaaccg 64

                          
Query: 61 gtctctttccctactg 76
          ||||||||||||||||
Sbjct: 65 gtctctttccctactg 80




>33976_ssc-mir-128-2:mirbase
          Length = 80

 Score =  127 bits (64), Expect = 1e-30
 Identities = 73/76 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
          ||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||
Sbjct: 2  cagtgggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaaccg 61

                          
Query: 61 gtctctttccctactg 76
          ||||||||||||||||
Sbjct: 62 gtctctttccctactg 77




>25946_gga-mir-128-2:mirbase
          Length = 84

 Score =  109 bits (55), Expect = 3e-25
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                      
Query: 6  ggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 65
          ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 69

             
Query: 66 ttt 68
          |||
Sbjct: 70 ttt 72




>26457_tgu-mir-128-2:mirbase
          Length = 110

 Score =  109 bits (55), Expect = 3e-25
 Identities = 61/63 (96%)
 Strand = Plus / Plus

                                                                      
Query: 6  ggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 65
          ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 84

             
Query: 66 ttt 68
          |||
Sbjct: 85 ttt 87




>27378_mdo-mir-128:mirbase
          Length = 84

 Score =  109 bits (55), Expect = 3e-25
 Identities = 64/67 (95%)
 Strand = Plus / Plus

                                                                      
Query: 6  ggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 65
          ||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgttacactgtcagagagtgagtagcaggtctcacagtgaaccggtctc 69

                 
Query: 66 tttccct 72
          |||||||
Sbjct: 70 tttccct 76




>31483_oan-mir-128-2:mirbase
          Length = 111

 Score =  109 bits (55), Expect = 3e-25
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                      
Query: 6  ggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 65
          ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 23 ggaaggggggccgttacactgtaagagagtgagtaccaggtctcacagtgaaccggtctc 82

                     
Query: 66 tttccctactg 76
          |||||| ||||
Sbjct: 83 tttcccgactg 93




>26695_cfa-mir-128-2:mirbase
          Length = 58

 Score = 99.6 bits (50), Expect = 3e-22
 Identities = 56/58 (96%)
 Strand = Plus / Plus

                                                                    
Query: 11 gggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctcttt 68
          |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccggtctcttt 58




>25769_xtr-mir-128-2:mirbase
          Length = 80

 Score = 93.7 bits (47), Expect = 2e-20
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                      
Query: 6  ggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 65
          |||| |||||||| | |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 9  ggaacgggggccgttacactgtaagagagtgagtagtaggtctcacagtgaaccggtctc 68

             
Query: 66 ttt 68
          |||
Sbjct: 69 ttt 71




>25476_pma-mir-128-1:mirbase
          Length = 89

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 45 gtctcacagtgaaccggtctctttccct 72
          ||||||||||||||||||||||||||||
Sbjct: 53 gtctcacagtgaaccggtctctttccct 80




>25477_pma-mir-128-2:mirbase
          Length = 89

 Score = 54.0 bits (27), Expect = 1e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 46 tctcacagtgaaccggtctctttccct 72
          |||||||||||||||||||||||||||
Sbjct: 54 tctcacagtgaaccggtctctttccct 80




>34592_fru-mir-128-2:mirbase
          Length = 72

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 44 ggtctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||||
Sbjct: 40 ggtctcacagtgaaccggtctcttt 64




>34739_tni-mir-128-2:mirbase
          Length = 72

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 44 ggtctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||||
Sbjct: 40 ggtctcacagtgaaccggtctcttt 64




>31482_oan-mir-128-1:mirbase
          Length = 71

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 45 gtctcacagtgaaccggtctcttt 68
          ||||||||||||||||||||||||
Sbjct: 41 gtctcacagtgaaccggtctcttt 64




>34286_dre-mir-128-2:mirbase
          Length = 123

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 45 gtctcacagtgaaccggtctcttt 68
          ||||||||||||||||||||||||
Sbjct: 66 gtctcacagtgaaccggtctcttt 89




>25768_xtr-mir-128-1:mirbase
          Length = 83

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 49 tctcacagtgaaccggtctcttt 71




>25945_gga-mir-128-1:mirbase
          Length = 82

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70




>26456_tgu-mir-128-1:mirbase
          Length = 71

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 39 tctcacagtgaaccggtctcttt 61




>26694_cfa-mir-128-1:mirbase
          Length = 56

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 34 tctcacagtgaaccggtctcttt 56




>27017_eca-mir-128-2:mirbase
          Length = 70

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 42 tctcacagtgaaccggtctcttt 64




>27510_age-mir-128:mirbase
          Length = 82

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70




>27617_sla-mir-128:mirbase
          Length = 82

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70




>27723_mml-mir-128a:mirbase
          Length = 82

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70




>28437_hsa-mir-128-1:mirbase
          Length = 82

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70




>30089_ppa-mir-128:mirbase
          Length = 82

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70




>30214_ptr-mir-128-1:mirbase
          Length = 82

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70




>30823_ppy-mir-128:mirbase
          Length = 82

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70




>31850_mmu-mir-128-1:mirbase
          Length = 70

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 42 tctcacagtgaaccggtctcttt 64




>32727_rno-mir-128-1:mirbase
          Length = 82

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70




>33206_bta-mir-128-1:mirbase
          Length = 82

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70




>33975_ssc-mir-128-1:mirbase
          Length = 82

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70




>34285_dre-mir-128-1:mirbase
          Length = 98

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 58 tctcacagtgaaccggtctcttt 80




>34591_fru-mir-128-1:mirbase
          Length = 85

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 49 tctcacagtgaaccggtctcttt 71




>34738_tni-mir-128-1:mirbase
          Length = 72

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 46 tctcacagtgaaccggtctcttt 68
          |||||||||||||||||||||||
Sbjct: 44 tctcacagtgaaccggtctcttt 66