miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32728_rno-mir-128-2:mirbase
Length = 84
Score = 151 bits (76), Expect = 8e-38
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1 cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 64
Query: 61 gtctctttccctactg 76
||||||||||||||||
Sbjct: 65 gtctctttccctactg 80
>27016_eca-mir-128:mirbase
Length = 84
Score = 143 bits (72), Expect = 2e-35
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 1 cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5 cagtgggaaggggggccgatgcactgtacgagagtgagtagcaggtctcacagtgaaccg 64
Query: 61 gtctctttccctactg 76
||||||||||||||||
Sbjct: 65 gtctctttccctactg 80
>27724_mml-mir-128b:mirbase
Length = 84
Score = 135 bits (68), Expect = 5e-33
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 1 cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 5 cagtgggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccg 64
Query: 61 gtctctttccctactg 76
||||||||||||||||
Sbjct: 65 gtctctttccctactg 80
>28438_hsa-mir-128-2:mirbase
Length = 84
Score = 135 bits (68), Expect = 5e-33
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 1 cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 5 cagtgggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccg 64
Query: 61 gtctctttccctactg 76
||||||||||||||||
Sbjct: 65 gtctctttccctactg 80
>30215_ptr-mir-128-2:mirbase
Length = 83
Score = 135 bits (68), Expect = 5e-33
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 1 cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 4 cagtgggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccg 63
Query: 61 gtctctttccctactg 76
||||||||||||||||
Sbjct: 64 gtctctttccctactg 79
>30824_ppy-mir-128-2:mirbase
Length = 84
Score = 135 bits (68), Expect = 5e-33
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 1 cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 5 cagtgggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccg 64
Query: 61 gtctctttccctactg 76
||||||||||||||||
Sbjct: 65 gtctctttccctactg 80
>33207_bta-mir-128-2:mirbase
Length = 84
Score = 127 bits (64), Expect = 1e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 1 cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 5 cagtgggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaaccg 64
Query: 61 gtctctttccctactg 76
||||||||||||||||
Sbjct: 65 gtctctttccctactg 80
>33976_ssc-mir-128-2:mirbase
Length = 80
Score = 127 bits (64), Expect = 1e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 1 cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 2 cagtgggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaaccg 61
Query: 61 gtctctttccctactg 76
||||||||||||||||
Sbjct: 62 gtctctttccctactg 77
>25946_gga-mir-128-2:mirbase
Length = 84
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 6 ggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 65
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 66 ttt 68
|||
Sbjct: 70 ttt 72
>26457_tgu-mir-128-2:mirbase
Length = 110
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 6 ggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 65
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 84
Query: 66 ttt 68
|||
Sbjct: 85 ttt 87
>27378_mdo-mir-128:mirbase
Length = 84
Score = 109 bits (55), Expect = 3e-25
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 6 ggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 65
||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgttacactgtcagagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 66 tttccct 72
|||||||
Sbjct: 70 tttccct 76
>31483_oan-mir-128-2:mirbase
Length = 111
Score = 109 bits (55), Expect = 3e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 6 ggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 65
||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 23 ggaaggggggccgttacactgtaagagagtgagtaccaggtctcacagtgaaccggtctc 82
Query: 66 tttccctactg 76
|||||| ||||
Sbjct: 83 tttcccgactg 93
>26695_cfa-mir-128-2:mirbase
Length = 58
Score = 99.6 bits (50), Expect = 3e-22
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 11 gggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctcttt 68
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccggtctcttt 58
>25769_xtr-mir-128-2:mirbase
Length = 80
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 6 ggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 65
|||| |||||||| | |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 9 ggaacgggggccgttacactgtaagagagtgagtagtaggtctcacagtgaaccggtctc 68
Query: 66 ttt 68
|||
Sbjct: 69 ttt 71
>25476_pma-mir-128-1:mirbase
Length = 89
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 45 gtctcacagtgaaccggtctctttccct 72
||||||||||||||||||||||||||||
Sbjct: 53 gtctcacagtgaaccggtctctttccct 80
>25477_pma-mir-128-2:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctctttccct 72
|||||||||||||||||||||||||||
Sbjct: 54 tctcacagtgaaccggtctctttccct 80
>34592_fru-mir-128-2:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 ggtctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||||
Sbjct: 40 ggtctcacagtgaaccggtctcttt 64
>34739_tni-mir-128-2:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 ggtctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||||
Sbjct: 40 ggtctcacagtgaaccggtctcttt 64
>31482_oan-mir-128-1:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 45 gtctcacagtgaaccggtctcttt 68
||||||||||||||||||||||||
Sbjct: 41 gtctcacagtgaaccggtctcttt 64
>34286_dre-mir-128-2:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 45 gtctcacagtgaaccggtctcttt 68
||||||||||||||||||||||||
Sbjct: 66 gtctcacagtgaaccggtctcttt 89
>25768_xtr-mir-128-1:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 49 tctcacagtgaaccggtctcttt 71
>25945_gga-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>26456_tgu-mir-128-1:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 39 tctcacagtgaaccggtctcttt 61
>26694_cfa-mir-128-1:mirbase
Length = 56
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 34 tctcacagtgaaccggtctcttt 56
>27017_eca-mir-128-2:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 42 tctcacagtgaaccggtctcttt 64
>27510_age-mir-128:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>27617_sla-mir-128:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>27723_mml-mir-128a:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>28437_hsa-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>30089_ppa-mir-128:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>30214_ptr-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>30823_ppy-mir-128:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>31850_mmu-mir-128-1:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 42 tctcacagtgaaccggtctcttt 64
>32727_rno-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>33206_bta-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>33975_ssc-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>34285_dre-mir-128-1:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 58 tctcacagtgaaccggtctcttt 80
>34591_fru-mir-128-1:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 49 tctcacagtgaaccggtctcttt 71
>34738_tni-mir-128-1:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tctcacagtgaaccggtctcttt 68
|||||||||||||||||||||||
Sbjct: 44 tctcacagtgaaccggtctcttt 66
