miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00699;mir-134;AAGW01206555.1/3367-3438 9986:Oryctolagus
cuniculus (rabbit)
Length = 72
Score = 109 bits (55), Expect = 5e-24
Identities = 68/71 (95%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 agggtgtgtgactggttgaccagaggggcgtgcactctgttcaccctgtgggccacctag 60
||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 2 agggtgtgtgactggttgaccagaggg-cgtgcgctgtgttcaccctgtgggccacctag 60
Query: 61 tcaccaaccct 71
|||||||||||
Sbjct: 61 tcaccaaccct 71
>RF00699;mir-134;ABRP01151524.1/10866-10938 132908:Pteropus
vampyrus (large flying fox)
Length = 73
Score = 85.7 bits (43), Expect = 7e-17
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1 agggtgtgtgactggttgaccagaggggcgtgcactctgttcaccctgtgggccacctag 60
||||||||||||||| |||||||||| || ||||||||||| ||| |||||||||||||
Sbjct: 2 agggtgtgtgactggctgaccagaggtgcaagcactctgttccccccgtgggccacctag 61
Query: 61 tcaccaaccct 71
|||||| ||||
Sbjct: 62 tcaccacccct 72
