miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26705_cfa-mir-135a-1:mirbase
Length = 87
Score = 131 bits (66), Expect = 9e-32
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 1 aggcctcactgttctctatggctttttattcctatgtgattctattgctcgctcatatag 60
||||||| ||||||||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 1 aggcctcgctgttctctatggctttttattcctatgtgattttactgctcactcatatag 60
Query: 61 ggattggagccgtggcgtacgg 82
||||||||||||||||||||||
Sbjct: 61 ggattggagccgtggcgtacgg 82
>27512_age-mir-135-1:mirbase
Length = 90
Score = 131 bits (66), Expect = 9e-32
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 1 aggcctcactgttctctatggctttttattcctatgtgattctattgctcgctcatatag 60
||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1 aggcctcgctgttctctatggctttttattcctatgtgattctactgctcactcatatag 60
Query: 61 ggattggagccgtggcgtacgg 82
||||||||||||||||| ||||
Sbjct: 61 ggattggagccgtggcgcacgg 82
>27574_lla-mir-135-1:mirbase
Length = 90
Score = 131 bits (66), Expect = 9e-32
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 1 aggcctcactgttctctatggctttttattcctatgtgattctattgctcgctcatatag 60
||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1 aggcctcgctgttctctatggctttttattcctatgtgattctactgctcactcatatag 60
Query: 61 ggattggagccgtggcgtacgg 82
||||||||||||||||| ||||
Sbjct: 61 ggattggagccgtggcgcacgg 82
>27735_mml-mir-135a-1:mirbase
Length = 90
Score = 131 bits (66), Expect = 9e-32
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 1 aggcctcactgttctctatggctttttattcctatgtgattctattgctcgctcatatag 60
||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1 aggcctcgctgttctctatggctttttattcctatgtgattctactgctcactcatatag 60
Query: 61 ggattggagccgtggcgtacgg 82
||||||||||||||||| ||||
Sbjct: 61 ggattggagccgtggcgcacgg 82
>28449_hsa-mir-135a-1:mirbase
Length = 90
Score = 131 bits (66), Expect = 9e-32
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 1 aggcctcactgttctctatggctttttattcctatgtgattctattgctcgctcatatag 60
||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1 aggcctcgctgttctctatggctttttattcctatgtgattctactgctcactcatatag 60
Query: 61 ggattggagccgtggcgtacgg 82
||||||||||||||||| ||||
Sbjct: 61 ggattggagccgtggcgcacgg 82
>30093_ppa-mir-135-1:mirbase
Length = 90
Score = 131 bits (66), Expect = 9e-32
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 1 aggcctcactgttctctatggctttttattcctatgtgattctattgctcgctcatatag 60
||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1 aggcctcgctgttctctatggctttttattcctatgtgattctactgctcactcatatag 60
Query: 61 ggattggagccgtggcgtacgg 82
||||||||||||||||| ||||
Sbjct: 61 ggattggagccgtggcgcacgg 82
>30224_ptr-mir-135a-1:mirbase
Length = 89
Score = 131 bits (66), Expect = 9e-32
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 1 aggcctcactgttctctatggctttttattcctatgtgattctattgctcgctcatatag 60
||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1 aggcctcgctgttctctatggctttttattcctatgtgattctactgctcactcatatag 60
Query: 61 ggattggagccgtggcgtacgg 82
||||||||||||||||| ||||
Sbjct: 61 ggattggagccgtggcgcacgg 82
>30835_ppy-mir-135a-1:mirbase
Length = 90
Score = 131 bits (66), Expect = 9e-32
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 1 aggcctcactgttctctatggctttttattcctatgtgattctattgctcgctcatatag 60
||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1 aggcctcgctgttctctatggctttttattcctatgtgattctactgctcactcatatag 60
Query: 61 ggattggagccgtggcgtacgg 82
||||||||||||||||| ||||
Sbjct: 61 ggattggagccgtggcgcacgg 82
>33218_bta-mir-135a-1:mirbase
Length = 90
Score = 131 bits (66), Expect = 9e-32
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 1 aggcctcactgttctctatggctttttattcctatgtgattctattgctcgctcatatag 60
||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1 aggcctcgctgttctctatggctttttattcctatgtgattctactgctcactcatatag 60
Query: 61 ggattggagccgtggcgtacgg 82
||||||||||||||||| ||||
Sbjct: 61 ggattggagccgtggcgcacgg 82
>33986_ssc-mir-135-1:mirbase
Length = 90
Score = 123 bits (62), Expect = 2e-29
Identities = 77/82 (93%)
Strand = Plus / Plus
Query: 1 aggcctcactgttctctatggctttttattcctatgtgattctattgctcgctcatatag 60
||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1 aggcctcgctgttctctatggctttttattcctatgtgattctactgctcattcatatag 60
Query: 61 ggattggagccgtggcgtacgg 82
||||||||||||||||| ||||
Sbjct: 61 ggattggagccgtggcgcacgg 82
>27029_eca-mir-135a:mirbase
Length = 60
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 16 ctatggctttttattcctatgtgattctattgctcgctcatatagggattggagccgtgg 75
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 1 ctatggctttttattcctatgtgattctactgctcactcatatagggattggagccgtgg 60
>25954_gga-mir-135a-1:mirbase
Length = 88
Score = 65.9 bits (33), Expect = 5e-12
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 3 gcctcactgttctctatggctttttattcctatgtgattctattgctcgc-tcatatagg 61
|||||||||| || ||||||||||||||||||||||||| || | ||| |||||||||
Sbjct: 1 gcctcactgtcctgtatggctttttattcctatgtgattatacatcccgcttcatatagg 60
Query: 62 gattggagccgtg 74
||||| |||||||
Sbjct: 61 gattgaagccgtg 73
>25956_gga-mir-135a-3:mirbase
Length = 96
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 15 tctatggctttttattcctatgtgatt 41
|||||||||||||||||||||||||||
Sbjct: 14 tctatggctttttattcctatgtgatt 40
>31492_oan-mir-135b:mirbase
Length = 114
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 ctatggctttttattcctatgtgatt 41
||||||||||||||||||||||||||
Sbjct: 30 ctatggctttttattcctatgtgatt 55
>25487_pma-mir-135a:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgatt 41
|||||||||||||||||||||||||
Sbjct: 15 tatggctttttattcctatgtgatt 39
>25781_xtr-mir-135-2:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgatt 41
|||||||||||||||||||||||||
Sbjct: 16 tatggctttttattcctatgtgatt 40
>26466_tgu-mir-135a-2:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgatt 41
|||||||||||||||||||||||||
Sbjct: 15 tatggctttttattcctatgtgatt 39
>26467_tgu-mir-135b:mirbase
Length = 73
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgatt 41
|||||||||||||||||||||||||
Sbjct: 11 tatggctttttattcctatgtgatt 35
>25780_xtr-mir-135-1:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>25955_gga-mir-135a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>25957_gga-mir-135b:mirbase
Length = 67
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tgttctctatggctttttattcct 33
||||||||||||||||||||||||
Sbjct: 38 tgttctctatggctttttattcct 61
>26465_tgu-mir-135a-1:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 11 tatggctttttattcctatgtgat 34
>26706_cfa-mir-135a-2:mirbase
Length = 62
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 2 tatggctttttattcctatgtgat 25
>26707_cfa-mir-135a-2:mirbase
Length = 62
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 2 tatggctttttattcctatgtgat 25
>27030_eca-mir-135a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>27383_mdo-mir-135a:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>27513_age-mir-135-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>27575_lla-mir-135-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>27736_mml-mir-135a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>28306_ggo-mir-135:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>28450_hsa-mir-135a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>30094_ppa-mir-135-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>30225_ptr-mir-135a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>30834_ppy-mir-135:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>31491_oan-mir-135a:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 29 tatggctttttattcctatgtgat 52
>31864_mmu-mir-135a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>32737_rno-mir-135a:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>33219_bta-mir-135a-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>33987_ssc-mir-135-2:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
||||||||||||||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>34300_dre-mir-135a:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtga 39
|||||||||||||||||||||||
Sbjct: 16 tatggctttttattcctatgtga 38
>26708_cfa-mir-135b:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ctatggctttttattcctatgtgatt 41
||||||||||| ||||||||||||||
Sbjct: 14 ctatggcttttcattcctatgtgatt 39
>27031_eca-mir-135b:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ctatggctttttattcctatgtgatt 41
||||||||||| ||||||||||||||
Sbjct: 14 ctatggcttttcattcctatgtgatt 39
>27384_mdo-mir-135b:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ctatggctttttattcctatgtgatt 41
||||||||||| ||||||||||||||
Sbjct: 17 ctatggcttttcattcctatgtgatt 42
>27737_mml-mir-135b:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ctatggctttttattcctatgtgatt 41
||||||||||| ||||||||||||||
Sbjct: 15 ctatggcttttcattcctatgtgatt 40
>28451_hsa-mir-135b:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ctatggctttttattcctatgtgatt 41
||||||||||| ||||||||||||||
Sbjct: 15 ctatggcttttcattcctatgtgatt 40
>30226_ptr-mir-135b:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ctatggctttttattcctatgtgatt 41
||||||||||| ||||||||||||||
Sbjct: 15 ctatggcttttcattcctatgtgatt 40
>30836_ppy-mir-135b:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ctatggctttttattcctatgtgatt 41
||||||||||| ||||||||||||||
Sbjct: 15 ctatggcttttcattcctatgtgatt 40
>31865_mmu-mir-135b:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ctatggctttttattcctatgtgatt 41
||||||||||| ||||||||||||||
Sbjct: 15 ctatggcttttcattcctatgtgatt 40
>32738_rno-mir-135b:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ctatggctttttattcctatgtgatt 41
||||||||||| ||||||||||||||
Sbjct: 15 ctatggcttttcattcctatgtgatt 40
>33220_bta-mir-135b:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ctatggctttttattcctatgtgatt 41
||||||||||| ||||||||||||||
Sbjct: 13 ctatggcttttcattcctatgtgatt 38
>34304_dre-mir-135c-3:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 8 actgttctctatggctttttattcctatgtgatt 41
||||| || ||||||||| |||||||||||||||
Sbjct: 27 actgtgctttatggctttctattcctatgtgatt 60
>34302_dre-mir-135c-1:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgatt 41
||||||||| |||||||||||||||
Sbjct: 11 tatggctttctattcctatgtgatt 35
>34303_dre-mir-135c-2:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgatt 41
||||||||| |||||||||||||||
Sbjct: 11 tatggctttctattcctatgtgatt 35
>34598_fru-mir-135a:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgatt 41
||||||||| |||||||||||||||
Sbjct: 11 tatggctttctattcctatgtgatt 35
>34745_tni-mir-135a:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgatt 41
||||||||| |||||||||||||||
Sbjct: 11 tatggctttctattcctatgtgatt 35
>25488_pma-mir-135b:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgat 40
|||||||||||||||||| |||||
Sbjct: 12 tatggctttttattcctacgtgat 35
>34599_fru-mir-135b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 17 tatggctttttattcctatgtgattctattgctcgctcatatagggat 64
||||||||||||||||||| ||| | || || | | ||||||||||||
Sbjct: 16 tatggctttttattcctatctgactgtactgatagttcatatagggat 63
