miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32738_rno-mir-135b:mirbase
Length = 97
Score = 184 bits (93), Expect = 8e-48
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 1 cgctctgctgtggcctatggcttttcattcctatgtgattgctgctccgaactcatgtag 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 cgctctgctgtggcctatggcttttcattcctatgtgattgctgttccgaactcatgtag 60
Query: 61 ggctaaaagccatgggctacagtgaggggcaagctcc 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggctaaaagccatgggctacagtgaggggcaagctcc 97
>30836_ppy-mir-135b:mirbase
Length = 97
Score = 165 bits (83), Expect = 7e-42
Identities = 92/95 (96%)
Strand = Plus / Plus
Query: 3 ctctgctgtggcctatggcttttcattcctatgtgattgctgctccgaactcatgtaggg 62
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 3 ctctgctgtggcctatggcttttcattcctatgtgattgctgtcccaaactcatgtaggg 62
Query: 63 ctaaaagccatgggctacagtgaggggcaagctcc 97
|||||||||||||||||||||||||||||||||||
Sbjct: 63 ctaaaagccatgggctacagtgaggggcaagctcc 97
>27737_mml-mir-135b:mirbase
Length = 97
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 3 ctctgctgtggcctatggcttttcattcctatgtgattgctgctccgaactcatgtaggg 62
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 3 ctctgctgtggcctatggcttttcattcctatgtgattgctgtcccaaactcatgtaggg 62
Query: 63 ctaaaagccatgggctacagtgaggggcaagctcc 97
|||||||||||||||||||||||||||| ||||||
Sbjct: 63 ctaaaagccatgggctacagtgaggggcgagctcc 97
>28451_hsa-mir-135b:mirbase
Length = 97
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 3 ctctgctgtggcctatggcttttcattcctatgtgattgctgctccgaactcatgtaggg 62
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 3 ctctgctgtggcctatggcttttcattcctatgtgattgctgtcccaaactcatgtaggg 62
Query: 63 ctaaaagccatgggctacagtgaggggcaagctcc 97
|||||||||||||||||||||||||||| ||||||
Sbjct: 63 ctaaaagccatgggctacagtgaggggcgagctcc 97
>30226_ptr-mir-135b:mirbase
Length = 96
Score = 155 bits (78), Expect = 7e-39
Identities = 90/94 (95%)
Strand = Plus / Plus
Query: 3 ctctgctgtggcctatggcttttcattcctatgtgattgctgctccgaactcatgtaggg 62
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 3 ctctgctgtggcctatggcttttcattcctatgtgattgctgtcccaaactcatgtaggg 62
Query: 63 ctaaaagccatgggctacagtgaggggcaagctc 96
|||||||||||||||||||||||||||| |||||
Sbjct: 63 ctaaaagccatgggctacagtgaggggcgagctc 96
>27031_eca-mir-135b:mirbase
Length = 89
Score = 153 bits (77), Expect = 3e-38
Identities = 86/89 (96%)
Strand = Plus / Plus
Query: 2 gctctgctgtggcctatggcttttcattcctatgtgattgctgctccgaactcatgtagg 61
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 1 gctctgctgtggcctatggcttttcattcctatgtgattgctgttctaaactcatgtagg 60
Query: 62 gctaaaagccatgggctacagtgaggggc 90
|||||||||||||||||||||||||||||
Sbjct: 61 gctaaaagccatgggctacagtgaggggc 89
>33220_bta-mir-135b:mirbase
Length = 95
Score = 151 bits (76), Expect = 1e-37
Identities = 85/88 (96%)
Strand = Plus / Plus
Query: 3 ctctgctgtggcctatggcttttcattcctatgtgattgctgctccgaactcatgtaggg 62
|||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||
Sbjct: 1 ctctgctgtggcctatggcttttcattcctatgtgattactgttccaaactcatgtaggg 60
Query: 63 ctaaaagccatgggctacagtgaggggc 90
||||||||||||||||||||||||||||
Sbjct: 61 ctaaaagccatgggctacagtgaggggc 88
>27384_mdo-mir-135b:mirbase
Length = 100
Score = 149 bits (75), Expect = 4e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 3 ctctgctgtggcctatggcttttcattcctatgtgattgctgctccgaactcatgtaggg 62
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 5 ctctgctgtggcctatggcttttcattcctatgtgattgctgttcccaactcatgtaggg 64
Query: 63 ctaaaagccatgggctacagtgagggg 89
|||||||||||||||||||| ||||||
Sbjct: 65 ctaaaagccatgggctacagggagggg 91
>26708_cfa-mir-135b:mirbase
Length = 89
Score = 145 bits (73), Expect = 7e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 2 gctctgctgtggcctatggcttttcattcctatgtgattgctgctccgaactcatgtagg 61
||||||||||||||||||||||||||||||||||||||||||| | | || |||||||||
Sbjct: 1 gctctgctgtggcctatggcttttcattcctatgtgattgctgtttctaattcatgtagg 60
Query: 62 gctaaaagccatgggctacagtgaggggc 90
|||||||||||||||||||||||||||||
Sbjct: 61 gctaaaagccatgggctacagtgaggggc 89
>31492_oan-mir-135b:mirbase
Length = 114
Score = 133 bits (67), Expect = 3e-32
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 3 ctctgctgtggcctatggcttttcattcctatgtgattgctgctccgaactcatgtaggg 62
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 18 ctctgctgtggcctatggctttttattcctatgtgattgctgctttgaactcatgtaggg 77
Query: 63 ctaaaagccatgggctacagtgagggg 89
|| ||||||||||||||||| ||||||
Sbjct: 78 ctgaaagccatgggctacagagagggg 104
>25956_gga-mir-135a-3:mirbase
Length = 96
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 3 ctctgctgtggcctatggcttttcattcctatgtgattgctgctccgaactcatgtaggg 62
||||||||||| ||||||||||| ||||||||||||||||| ||| |||||||||||||
Sbjct: 3 ctctgctgtggtctatggctttttattcctatgtgattgcttttcctaactcatgtaggg 62
Query: 63 ctaaaagccatgggctac 80
| ||||||||||||||||
Sbjct: 63 cgaaaagccatgggctac 80
>26466_tgu-mir-135a-2:mirbase
Length = 86
Score = 101 bits (51), Expect = 9e-23
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 3 ctctgctgtggcctatggcttttcattcctatgtgattgctgctccgaactcatgtaggg 62
||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 2 ctctgctgtggtttatggctttttattcctatgtgattgctttcccgaactcatgtaggg 61
Query: 63 ctaaaagccatgggctaca 81
| |||||||||||||||||
Sbjct: 62 cgaaaagccatgggctaca 80
>25487_pma-mir-135a:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgattgct 43
|||||||||| |||||||||||||||||
Sbjct: 15 tatggctttttattcctatgtgattgct 42
>25781_xtr-mir-135-2:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgattgct 43
|||||||||| |||||||||||||||||
Sbjct: 16 tatggctttttattcctatgtgattgct 43
>26705_cfa-mir-135a-1:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctatggcttttcattcctatgtgatt 40
||||||||||| ||||||||||||||
Sbjct: 16 ctatggctttttattcctatgtgatt 41
>27029_eca-mir-135a:mirbase
Length = 60
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctatggcttttcattcctatgtgatt 40
||||||||||| ||||||||||||||
Sbjct: 1 ctatggctttttattcctatgtgatt 26
>27512_age-mir-135-1:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctatggcttttcattcctatgtgatt 40
||||||||||| ||||||||||||||
Sbjct: 16 ctatggctttttattcctatgtgatt 41
>27574_lla-mir-135-1:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctatggcttttcattcctatgtgatt 40
||||||||||| ||||||||||||||
Sbjct: 16 ctatggctttttattcctatgtgatt 41
>27735_mml-mir-135a-1:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctatggcttttcattcctatgtgatt 40
||||||||||| ||||||||||||||
Sbjct: 16 ctatggctttttattcctatgtgatt 41
>28449_hsa-mir-135a-1:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctatggcttttcattcctatgtgatt 40
||||||||||| ||||||||||||||
Sbjct: 16 ctatggctttttattcctatgtgatt 41
>30093_ppa-mir-135-1:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctatggcttttcattcctatgtgatt 40
||||||||||| ||||||||||||||
Sbjct: 16 ctatggctttttattcctatgtgatt 41
>30224_ptr-mir-135a-1:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctatggcttttcattcctatgtgatt 40
||||||||||| ||||||||||||||
Sbjct: 16 ctatggctttttattcctatgtgatt 41
>30835_ppy-mir-135a-1:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctatggcttttcattcctatgtgatt 40
||||||||||| ||||||||||||||
Sbjct: 16 ctatggctttttattcctatgtgatt 41
>31863_mmu-mir-135a-1:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctatggcttttcattcctatgtgatt 40
||||||||||| ||||||||||||||
Sbjct: 16 ctatggctttttattcctatgtgatt 41
>33218_bta-mir-135a-1:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctatggcttttcattcctatgtgatt 40
||||||||||| ||||||||||||||
Sbjct: 16 ctatggctttttattcctatgtgatt 41
>33986_ssc-mir-135-1:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ctatggcttttcattcctatgtgatt 40
||||||||||| ||||||||||||||
Sbjct: 16 ctatggctttttattcctatgtgatt 41
>25954_gga-mir-135a-1:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgatt 40
|||||||||| ||||||||||||||
Sbjct: 15 tatggctttttattcctatgtgatt 39
>26467_tgu-mir-135b:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgatt 40
|||||||||| ||||||||||||||
Sbjct: 11 tatggctttttattcctatgtgatt 35
>25780_xtr-mir-135-1:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>25955_gga-mir-135a-2:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>26465_tgu-mir-135a-1:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 11 tatggctttttattcctatgtgat 34
>26706_cfa-mir-135a-2:mirbase
Length = 62
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 2 tatggctttttattcctatgtgat 25
>26707_cfa-mir-135a-2:mirbase
Length = 62
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 2 tatggctttttattcctatgtgat 25
>27030_eca-mir-135a-2:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>27383_mdo-mir-135a:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>27513_age-mir-135-2:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>27575_lla-mir-135-2:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>27736_mml-mir-135a-2:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>28306_ggo-mir-135:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>28450_hsa-mir-135a-2:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>30094_ppa-mir-135-2:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>30225_ptr-mir-135a-2:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>30834_ppy-mir-135:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>31491_oan-mir-135a:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 29 tatggctttttattcctatgtgat 52
>31864_mmu-mir-135a-2:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>32737_rno-mir-135a:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>33219_bta-mir-135a-2:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
>33987_ssc-mir-135-2:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tatggcttttcattcctatgtgat 39
|||||||||| |||||||||||||
Sbjct: 23 tatggctttttattcctatgtgat 46
