miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32746_rno-mir-141:mirbase
Length = 94
Score = 131 bits (66), Expect = 7e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 3 gtccatcttccagtgcagtgttggatggttgaagtatgaagctcctaacactgtctggta 62
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 13 gtccatcttccagtgcagtgttggatggttgaagtacgaagctcctaacactgtctggta 72
Query: 63 aagatggccc 72
||||||||||
Sbjct: 73 aagatggccc 82
>27040_eca-mir-141:mirbase
Length = 72
Score = 103 bits (52), Expect = 2e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 1 gggtccatcttccagtgcagtgttggatggttgaagtatgaagctcctaacactgtctgg 60
|||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||
Sbjct: 1 gggtccatcttccagtacagtgttggatggtctaattgtgaagctcctaacactgtctgg 60
Query: 61 taaagatggccc 72
||||||||||||
Sbjct: 61 taaagatggccc 72
>27745_mml-mir-141:mirbase
Length = 95
Score = 103 bits (52), Expect = 2e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 1 gggtccatcttccagtgcagtgttggatggttgaagtatgaagctcctaacactgtctgg 60
|||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||
Sbjct: 12 gggtccatcttccagtacagtgttggatggtctaattgtgaagctcctaacactgtctgg 71
Query: 61 taaagatggccc 72
||||||||||||
Sbjct: 72 taaagatggccc 83
>28308_ggo-mir-141:mirbase
Length = 95
Score = 103 bits (52), Expect = 2e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 1 gggtccatcttccagtgcagtgttggatggttgaagtatgaagctcctaacactgtctgg 60
|||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||
Sbjct: 12 gggtccatcttccagtacagtgttggatggtctaattgtgaagctcctaacactgtctgg 71
Query: 61 taaagatggccc 72
||||||||||||
Sbjct: 72 taaagatggccc 83
>30232_ptr-mir-141-1:mirbase
Length = 94
Score = 103 bits (52), Expect = 2e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 1 gggtccatcttccagtgcagtgttggatggttgaagtatgaagctcctaacactgtctgg 60
|||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||
Sbjct: 11 gggtccatcttccagtacagtgttggatggtctaattgtgaagctcctaacactgtctgg 70
Query: 61 taaagatggccc 72
||||||||||||
Sbjct: 71 taaagatggccc 82
>30233_ptr-mir-141-2:mirbase
Length = 94
Score = 103 bits (52), Expect = 2e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 1 gggtccatcttccagtgcagtgttggatggttgaagtatgaagctcctaacactgtctgg 60
|||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||
Sbjct: 11 gggtccatcttccagtacagtgttggatggtctaattgtgaagctcctaacactgtctgg 70
Query: 61 taaagatggccc 72
||||||||||||
Sbjct: 71 taaagatggccc 82
>28460_hsa-mir-141:mirbase
Length = 95
Score = 99.6 bits (50), Expect = 2e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 1 gggtccatcttccagtgcagtgttggatggttgaagtatgaagctcctaacactgtctgg 60
|||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||
Sbjct: 12 gggtccatcttccagtacagtgttggatggtctaattgtgaagctcctaacactgtctgg 71
Query: 61 taaagatggc 70
||||||||||
Sbjct: 72 taaagatggc 81
>30097_ppa-mir-141:mirbase
Length = 95
Score = 95.6 bits (48), Expect = 4e-21
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 1 gggtccatcttccagtgcagtgttggatggttgaagtatgaagctcctaacactgtctgg 60
|||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||
Sbjct: 12 gggtccatcttccagtacagtgttggatggtctaattgtgaagctcctaacactgtctgg 71
Query: 61 taaagatg 68
||||||||
Sbjct: 72 taaagatg 79
>30844_ppy-mir-141:mirbase
Length = 95
Score = 95.6 bits (48), Expect = 4e-21
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 1 gggtccatcttccagtgcagtgttggatggttgaagtatgaagctcctaacactgtctgg 60
|||| ||||||||||| |||||||||||||| || | ||||||||||||||||||||||
Sbjct: 12 gggttcatcttccagtacagtgttggatggtctaattgtgaagctcctaacactgtctgg 71
Query: 61 taaagatggccc 72
||||||||||||
Sbjct: 72 taaagatggccc 83
>26715_cfa-mir-141:mirbase
Length = 86
Score = 87.7 bits (44), Expect = 9e-19
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 1 gggtccatcttccagtgcagtgttggatggttgaagtatgaagctcctaacactgtctgg 60
|||||||||||||||| |||||||||||||| | | |||||||||||||||||||||
Sbjct: 10 gggtccatcttccagtacagtgttggatggtctagtcacgaagctcctaacactgtctgg 69
Query: 61 taaagatggccc 72
||||||||||||
Sbjct: 70 taaagatggccc 81
>33227_bta-mir-141:mirbase
Length = 90
Score = 87.7 bits (44), Expect = 9e-19
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 1 gggtccatcttccagtgcagtgttggatggttgaagtatgaagctcctaacactgtctgg 60
||||||||||||||| |||||||||||||| || ||||||||||||||||||||||
Sbjct: 11 gggtccatcttccagcacagtgttggatggtctaatggtgaagctcctaacactgtctgg 70
Query: 61 taaagatggccc 72
||||||||||||
Sbjct: 71 taaagatggccc 82
>27389_mdo-mir-141:mirbase
Length = 64
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 39 tgaagctcctaacactgtctggtaaagatg 68
||||||| ||||||||||||||||||||||
Sbjct: 32 tgaagcttctaacactgtctggtaaagatg 61
>24837_cin-mir-141:mirbase
Length = 75
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 ctaacactgtctggtaaagatg 68
||||||||||||||||||||||
Sbjct: 39 ctaacactgtctggtaaagatg 60
>25328_csa-mir-141:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 ctaacactgtctggtaaagatg 68
||||||||||||||||||||||
Sbjct: 47 ctaacactgtctggtaaagatg 68
