miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00241;mir-8;AAHX01032846.1/18098-18178 10116:Rattus norvegicus
(Norway rat)
Length = 81
Score = 131 bits (66), Expect = 1e-30
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 3 gtccatcttccagtgcagtgttggatggttgaagtatgaagctcctaacactgtctggta 62
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 7 gtccatcttccagtgcagtgttggatggttgaagtacgaagctcctaacactgtctggta 66
Query: 63 aagatggccc 72
||||||||||
Sbjct: 67 aagatggccc 76
>RF00241;mir-8;ABRQ01038381.1/1702-1622 9813:Procavia capensis
(cape rock hyrax)
Length = 81
Score = 87.7 bits (44), Expect = 2e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 5 ccatcttccagtgcagtgttggatggttgaagtatgaagctcctaacactgtctggtaaa 64
||||||||||| |||||||||||||| || | ||||||||||||||||||||||||||
Sbjct: 9 ccatcttccagcacagtgttggatggtctaattgtgaagctcctaacactgtctggtaaa 68
Query: 65 gatggccc 72
||||||||
Sbjct: 69 gatggccc 76
>RF00241;mir-8;AAFR03037717.1/783-855 13616:Monodelphis domestica
(gray short-tailed opossum)
Length = 73
Score = 52.0 bits (26), Expect = 9e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 39 tgaagctcctaacactgtctggtaaagatg 68
||||||| ||||||||||||||||||||||
Sbjct: 35 tgaagcttctaacactgtctggtaaagatg 64
