miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32799_rno-mir-208b:mirbase
Length = 112
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 76
Query: 61 ggtttgtctgagggctg 77
|||||||||||||||||
Sbjct: 77 ggtttgtctgagggctg 93
>32800_rno-mir-208b:mirbase
Length = 112
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 76
Query: 61 ggtttgtctgagggctg 77
|||||||||||||||||
Sbjct: 77 ggtttgtctgagggctg 93
>27094_eca-mir-208b:mirbase
Length = 77
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60
Query: 61 ggtttgtctgagggc 75
|||||||||||||||
Sbjct: 61 ggtttgtctgagggc 75
>33286_bta-mir-208b:mirbase
Length = 77
Score = 149 bits (75), Expect = 3e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60
Query: 61 ggtttgtctgagggc 75
|||||||||||||||
Sbjct: 61 ggtttgtctgagggc 75
>26769_cfa-mir-208b:mirbase
Length = 74
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60
Query: 61 ggtttgtctgaggg 74
||||||||||||||
Sbjct: 61 ggtttgtctgaggg 74
>34037_ssc-mir-208b:mirbase
Length = 80
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 2 ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 60
Query: 62 gtttgtctgagggc 75
||||||||||||||
Sbjct: 61 gtttgtctgagggc 74
>27805_mml-mir-208b:mirbase
Length = 77
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 1 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 1 cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60
Query: 61 ggtttgtctgagggc 75
|||||||||||||||
Sbjct: 61 ggtttgtctgagggc 75
>28527_hsa-mir-208b:mirbase
Length = 77
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 1 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 1 cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60
Query: 61 ggtttgtctgagggc 75
|||||||||||||||
Sbjct: 61 ggtttgtctgagggc 75
>30286_ptr-mir-208b:mirbase
Length = 76
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 1 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 1 cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60
Query: 61 ggtttgtctgagggc 75
|||||||||||||||
Sbjct: 61 ggtttgtctgagggc 75
>30904_ppy-mir-208b:mirbase
Length = 77
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 1 cctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaa 60
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 1 cctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaa 60
Query: 61 ggtttgtctgagggc 75
|||||||||||||||
Sbjct: 61 ggtttgtctgagggc 75
