miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>32014_mmu-mir-344-1:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 43 tagccaaagcctgactgtaag 63
          |||||||||||||||||||||
Sbjct: 66 tagccaaagcctgactgtaag 86

>32015_mmu-mir-344-2:mirbase
          Length = 80

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 43 tagccaaagcctgactgtaag 63
          |||||||||||||||||||||
Sbjct: 54 tagccaaagcctgactgtaag 74

>32017_mmu-mir-344c:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                               
Query: 2  tcagtcaggctcctggctaaagttcagctttcagctg 38
          ||||||||||| ||||||| ||| ||||| |||||||
Sbjct: 16 tcagtcaggctgctggctagagtacagctatcagctg 52

>32867_rno-mir-344a-2:mirbase
          Length = 107

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 43 tagccaaagcctgactgtaag 63
          |||||||||||||||||||||
Sbjct: 64 tagccaaagcctgactgtaag 84