miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32020_mmu-mir-344d-3:mirbase
Length = 80
Score = 101 bits (51), Expect = 6e-23
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 1 atcagtcaggctgctggctatacaccaggacttatctggtcctggatataaccactgcca 60
|||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 8 atcagtcaggctagtggttatactccaggacttatctggtcctggatataaccactgcca 67
Query: 61 gactgaa 67
|||||||
Sbjct: 68 gactgaa 74
>32019_mmu-mir-344d-2:mirbase
Length = 80
Score = 95.6 bits (48), Expect = 4e-21
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 12 tgctggctatacaccaggacttatctggtcctggatataaccactgccagactgaa 67
||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 tgctggctatattccaggacttatctggtcctggatataaccactgccagactgaa 74
>32868_rno-mir-344b-1:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 3e-15
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 1 atcagtcaggctgctggctatacaccaggacttatctggtcctggatataacca 54
||||||||||||||||| |||| ||||||||| ||||||||||||||||||||
Sbjct: 10 atcagtcaggctgctggttatattccaggacttctctggtcctggatataacca 63
>32869_rno-mir-344b-1:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 3e-15
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 1 atcagtcaggctgctggctatacaccaggacttatctggtcctggatataacca 54
||||||||||||||||| |||| ||||||||| ||||||||||||||||||||
Sbjct: 10 atcagtcaggctgctggttatattccaggacttctctggtcctggatataacca 63
>32021_mmu-mir-344e:mirbase
Length = 66
Score = 71.9 bits (36), Expect = 5e-14
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 3 cagtcaggctgctggctatacaccaggacttatctggtcctggatataacca 54
|||||||||| ||||||||| |||||||||| |||||||||||||||||||
Sbjct: 1 cagtcaggcttctggctatattccaggacttacctggtcctggatataacca 52
>32870_rno-mir-344b-2:mirbase
Length = 71
Score = 67.9 bits (34), Expect = 8e-13
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 1 atcagtcaggctgctggctatacaccaggacttatctggtcctggatataacca 54
||||||||||||||||| |||| ||||||||| ||||||||||| ||||||||
Sbjct: 3 atcagtcaggctgctggttatattccaggacttctctggtcctgggtataacca 56
>32871_rno-mir-344b-2:mirbase
Length = 71
Score = 67.9 bits (34), Expect = 8e-13
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 1 atcagtcaggctgctggctatacaccaggacttatctggtcctggatataacca 54
||||||||||||||||| |||| ||||||||| ||||||||||| ||||||||
Sbjct: 3 atcagtcaggctgctggttatattccaggacttctctggtcctgggtataacca 56
>32017_mmu-mir-344c:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 2 tcagtcaggctgctggcta 20
|||||||||||||||||||
Sbjct: 16 tcagtcaggctgctggcta 34
