miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32020_mmu-mir-344d-3:mirbase
Length = 80
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1 agatttcattagtctggttgctggctatattccaggacttatctggtcctggatataacc 60
||||||||| |||| || | ||| |||| ||||||||||||||||||||||||||||||
Sbjct: 1 agatttcatcagtcaggctagtggttatactccaggacttatctggtcctggatataacc 60
Query: 61 actgccagactgaatggtgc 80
||||||||||||||||||||
Sbjct: 61 actgccagactgaatggtgc 80
>32018_mmu-mir-344d-1:mirbase
Length = 69
Score = 95.6 bits (48), Expect = 4e-21
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 19 tgctggctatattccaggacttatctggtcctggatataaccactgccagactgaa 74
||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tgctggctatacaccaggacttatctggtcctggatataaccactgccagactgaa 67
>32021_mmu-mir-344e:mirbase
Length = 66
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 21 ctggctatattccaggacttatctggtcctggatataacca 61
||||||||||||||||||||| |||||||||||||||||||
Sbjct: 12 ctggctatattccaggacttacctggtcctggatataacca 52
>32868_rno-mir-344b-1:mirbase
Length = 98
Score = 69.9 bits (35), Expect = 3e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 19 tgctggctatattccaggacttatctggtcctggatataacca 61
|||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 21 tgctggttatattccaggacttctctggtcctggatataacca 63
>32869_rno-mir-344b-1:mirbase
Length = 98
Score = 69.9 bits (35), Expect = 3e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 19 tgctggctatattccaggacttatctggtcctggatataacca 61
|||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 21 tgctggttatattccaggacttctctggtcctggatataacca 63
>32870_rno-mir-344b-2:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 6e-11
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 19 tgctggctatattccaggacttatctggtcctggatataacca 61
|||||| ||||||||||||||| ||||||||||| ||||||||
Sbjct: 14 tgctggttatattccaggacttctctggtcctgggtataacca 56
>32871_rno-mir-344b-2:mirbase
Length = 71
Score = 61.9 bits (31), Expect = 6e-11
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 19 tgctggctatattccaggacttatctggtcctggatataacca 61
|||||| ||||||||||||||| ||||||||||| ||||||||
Sbjct: 14 tgctggttatattccaggacttctctggtcctgggtataacca 56
