miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32019_mmu-mir-344d-2:mirbase
Length = 80
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1 agatttcatcagtcaggctagtggttatactccaggacttatctggtcctggatataacc 60
||||||||| |||| || | ||| |||| ||||||||||||||||||||||||||||||
Sbjct: 1 agatttcattagtctggttgctggctatattccaggacttatctggtcctggatataacc 60
Query: 61 actgccagactgaatggtgc 80
||||||||||||||||||||
Sbjct: 61 actgccagactgaatggtgc 80
>32018_mmu-mir-344d-1:mirbase
Length = 69
Score = 101 bits (51), Expect = 7e-23
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 8 atcagtcaggctagtggttatactccaggacttatctggtcctggatataaccactgcca 67
|||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcagtcaggctgctggctatacaccaggacttatctggtcctggatataaccactgcca 60
Query: 68 gactgaa 74
|||||||
Sbjct: 61 gactgaa 67
>32868_rno-mir-344b-1:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 4e-15
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 8 atcagtcaggctagtggttatactccaggacttatctggtcctggatataacca 61
|||||||||||| |||||||| |||||||||| ||||||||||||||||||||
Sbjct: 10 atcagtcaggctgctggttatattccaggacttctctggtcctggatataacca 63
>32869_rno-mir-344b-1:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 4e-15
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 8 atcagtcaggctagtggttatactccaggacttatctggtcctggatataacca 61
|||||||||||| |||||||| |||||||||| ||||||||||||||||||||
Sbjct: 10 atcagtcaggctgctggttatattccaggacttctctggtcctggatataacca 63
>32870_rno-mir-344b-2:mirbase
Length = 71
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 8 atcagtcaggctagtggttatactccaggacttatctggtcctggatataacca 61
|||||||||||| |||||||| |||||||||| ||||||||||| ||||||||
Sbjct: 3 atcagtcaggctgctggttatattccaggacttctctggtcctgggtataacca 56
>32871_rno-mir-344b-2:mirbase
Length = 71
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 8 atcagtcaggctagtggttatactccaggacttatctggtcctggatataacca 61
|||||||||||| |||||||| |||||||||| ||||||||||| ||||||||
Sbjct: 3 atcagtcaggctgctggttatattccaggacttctctggtcctgggtataacca 56
>32021_mmu-mir-344e:mirbase
Length = 66
Score = 63.9 bits (32), Expect = 2e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 10 cagtcaggctagtggttatactccaggacttatctggtcctggatataacca 61
|||||||||| ||| |||| ||||||||||| |||||||||||||||||||
Sbjct: 1 cagtcaggcttctggctatattccaggacttacctggtcctggatataacca 52
