miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32874_rno-mir-346:mirbase
Length = 98
Score = 178 bits (90), Expect = 5e-46
Identities = 96/98 (97%)
Strand = Plus / Plus
Query: 1 tctgtgttgggcgtctgtctgcccgagtgcctgcctctctgttgctctgaaggaggcagg 60
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctgtgttgggcatctgtctgcctgagtgcctgcctctctgttgctctgaaggaggcagg 60
Query: 61 ggctgggcctgcagctgcctgggcagagctgctccttc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggctgggcctgcagctgcctgggcagagctgctccttc 98
>27139_eca-mir-346:mirbase
Length = 95
Score = 161 bits (81), Expect = 1e-40
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 1 tctgtgttgggcgtctgtctgcccgagtgcctgcctctctgttgctctgaaggaggcagg 60
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5 tctgtgttgggcgtctgtctgcccgcatgcctgcctctctgttgctctgaaggaggcagg 64
Query: 61 ggctgggcctgcagctgcctgggcagagc 89
|||||||||||||||||||||||||||||
Sbjct: 65 ggctgggcctgcagctgcctgggcagagc 93
>28595_hsa-mir-346:mirbase
Length = 95
Score = 161 bits (81), Expect = 1e-40
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 1 tctgtgttgggcgtctgtctgcccgagtgcctgcctctctgttgctctgaaggaggcagg 60
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5 tctgtgttgggcgtctgtctgcccgcatgcctgcctctctgttgctctgaaggaggcagg 64
Query: 61 ggctgggcctgcagctgcctgggcagagc 89
|||||||||||||||||||||||||||||
Sbjct: 65 ggctgggcctgcagctgcctgggcagagc 93
>30339_ptr-mir-346:mirbase
Length = 94
Score = 161 bits (81), Expect = 1e-40
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 1 tctgtgttgggcgtctgtctgcccgagtgcctgcctctctgttgctctgaaggaggcagg 60
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5 tctgtgttgggcgtctgtctgcccgcatgcctgcctctctgttgctctgaaggaggcagg 64
Query: 61 ggctgggcctgcagctgcctgggcagagc 89
|||||||||||||||||||||||||||||
Sbjct: 65 ggctgggcctgcagctgcctgggcagagc 93
>30962_ppy-mir-346:mirbase
Length = 95
Score = 161 bits (81), Expect = 1e-40
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 1 tctgtgttgggcgtctgtctgcccgagtgcctgcctctctgttgctctgaaggaggcagg 60
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5 tctgtgttgggcgtctgtctgcccgcatgcctgcctctctgttgctctgaaggaggcagg 64
Query: 61 ggctgggcctgcagctgcctgggcagagc 89
|||||||||||||||||||||||||||||
Sbjct: 65 ggctgggcctgcagctgcctgggcagagc 93
>33333_bta-mir-346:mirbase
Length = 95
Score = 153 bits (77), Expect = 3e-38
Identities = 86/89 (96%)
Strand = Plus / Plus
Query: 1 tctgtgttgggcgtctgtctgcccgagtgcctgcctctctgttgctctgaaggaggcagg 60
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5 tctgtgttgggcgtctgtctgcccgcatgcctgcctctctgttgctctgaaggaggcagg 64
Query: 61 ggctgggcctgcagctgcctgggcagagc 89
|||||||| ||||||||||||||||||||
Sbjct: 65 ggctgggcttgcagctgcctgggcagagc 93
>27858_mml-mir-346:mirbase
Length = 86
Score = 143 bits (72), Expect = 3e-35
Identities = 81/84 (96%)
Strand = Plus / Plus
Query: 13 gtctgtctgcccgagtgcctgcctctctgttgctctgaaggaggcaggggctgggcctgc 72
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctgtctgcccgcatgcctgcctctctgttgctctgaaggaggcaggggctgggcctgc 60
Query: 73 agctgcctgggcagagctgctcct 96
||||||||||||||||| ||||||
Sbjct: 61 agctgcctgggcagagcggctcct 84
>26809_cfa-mir-346:mirbase
Length = 95
Score = 137 bits (69), Expect = 2e-33
Identities = 84/89 (94%)
Strand = Plus / Plus
Query: 1 tctgtgttgggcgtctgtctgcccgagtgcctgcctctctgttgctctgaaggaggcagg 60
|||||| |||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 5 tctgtggtgggcgtctgtctgcccgcatgcctgcctctttgttgctcggaaggaggcagg 64
Query: 61 ggctgggcctgcagctgcctgggcagagc 89
|||||||||||||||||||||||||||||
Sbjct: 65 ggctgggcctgcagctgcctgggcagagc 93
