miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>32877_rno-mir-350:mirbase
          Length = 99

 Score =  180 bits (91), Expect = 1e-46
 Identities = 97/99 (97%)
 Strand = Plus / Plus

                                                                      
Query: 1  agatgccttgctcctacaagagtaaagtgcatgcgctttgggacagtgaggaaaataatg 60
          ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 1  agatgccttgctcctacaagagtaaagtgcacgtgctttgggacagtgaggaaaataatg 60

                                                 
Query: 61 ttcacaaagcccatacactttcaccctttaggagagttg 99
          |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacaaagcccatacactttcaccctttaggagagttg 99




>27140_eca-mir-350:mirbase
          Length = 96

 Score =  129 bits (65), Expect = 4e-31
 Identities = 83/89 (93%)
 Strand = Plus / Plus

                                                                      
Query: 8  ttgctcctacaagagtaaagtgcatgcgctttgggacagtgaggaaaataatgttcacaa 67
          ||||||||| |||||||||||||| ||||||||||||||||||||| || ||||||||||
Sbjct: 8  ttgctcctataagagtaaagtgcacgcgctttgggacagtgaggaagatgatgttcacaa 67

                                       
Query: 68 agcccatacactttcaccctttaggagag 96
          |||||||||||||| || |||||||||||
Sbjct: 68 agcccatacacttttactctttaggagag 96




>26810_cfa-mir-350:mirbase
          Length = 57

 Score = 95.6 bits (48), Expect = 6e-21
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                  
Query: 26 agtgcatgcgctttgggacagtgaggaaaataatgttcacaaagcccatacacttt 81
          |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1  agtgcacgcgctttgggacagtgaagaaaataatgttcacaaagcccatacacttt 56