miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26023_gga-mir-367:mirbase
Length = 73
Score = 113 bits (57), Expect = 2e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 9 actgttgctaacatgcaactctgttgaatagaaattggaattgcactttagcaatggtga 68
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 9 actgttgctaacatgcaactctgttgtataaaaattggaattgcactttagcaatggtga 68
Query: 69 tggac 73
|||||
Sbjct: 69 tggac 73
>28603_hsa-mir-367:mirbase
Length = 68
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 9 actgttgctaacatgcaactctgttgaatagaaattggaattgcactttagcaatggtga 68
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6 actgttgctaatatgcaactctgttgaatataaattggaattgcactttagcaatggtga 65
Query: 69 tgg 71
|||
Sbjct: 66 tgg 68
>30344_ptr-mir-367:mirbase
Length = 67
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 9 actgttgctaacatgcaactctgttgaatagaaattggaattgcactttagcaatggtga 68
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6 actgttgctaatatgcaactctgttgaatataaattggaattgcactttagcaatggtga 65
Query: 69 tg 70
||
Sbjct: 66 tg 67
>26816_cfa-mir-367:mirbase
Length = 68
Score = 101 bits (51), Expect = 7e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 9 actgttgctaacatgcaactctgttgaatagaaattggaattgcactttagcaatggtga 68
||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 6 actgttgctaatatgcaactctgttcaatacaaattggaattgcactttagcaatggtga 65
Query: 69 tgg 71
|||
Sbjct: 66 tgg 68
>27866_mml-mir-367:mirbase
Length = 68
Score = 101 bits (51), Expect = 7e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 9 actgttgctaacatgcaactctgttgaatagaaattggaattgcactttagcaatggtga 68
||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 6 actgttgctaatatgcaactctgttgaacacaaattggaattgcactttagcaatggtga 65
Query: 69 tgg 71
|||
Sbjct: 66 tgg 68
>30970_ppy-mir-367:mirbase
Length = 68
Score = 101 bits (51), Expect = 7e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 9 actgttgctaacatgcaactctgttgaatagaaattggaattgcactttagcaatggtga 68
||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 6 actgttgctaatatgcaactctgtttaatataaattggaattgcactttagcaatggtga 65
Query: 69 tgg 71
|||
Sbjct: 66 tgg 68
>33341_bta-mir-367:mirbase
Length = 68
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 9 actgttgctaacatgcaactctgttgaatagaaattggaattgcactttagcaatggtga 68
||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 6 actgttgctaatatgcaactctgttcaattcaaattggaattgcactttagcaatggtga 65
Query: 69 tgg 71
|||
Sbjct: 66 tgg 68
>27148_eca-mir-367:mirbase
Length = 68
Score = 91.7 bits (46), Expect = 6e-20
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 7 tcactgttgctaacatgcaactctgttgaatagaaattggaattgcactttagcaatggt 66
||||||||||||| ||||||||||||| |||| ||| |||||||||||||||||||||||
Sbjct: 4 tcactgttgctaatatgcaactctgttcaatacaaactggaattgcactttagcaatggt 63
Query: 67 ga 68
||
Sbjct: 64 ga 65
>27446_mdo-mir-367:mirbase
Length = 63
Score = 77.8 bits (39), Expect = 1e-15
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 9 actgttgctaacatgcaactctgttgaatagaaattggaattgcactttagcaatggtga 68
||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 1 actgttgctaacatgcaactctgttctatgtaaacgggaattgcactttagcaatggtga 60
Query: 69 tgg 71
|||
Sbjct: 61 tgg 63
>25852_xtr-mir-367:mirbase
Length = 63
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 46 gaattgcactttagcaatggtga 68
|||||||||| ||||||||||||
Sbjct: 41 gaattgcactgtagcaatggtga 63
