miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32042_mmu-mir-374:mirbase
Length = 95
Score = 97.6 bits (49), Expect = 6e-22
Identities = 49/49 (100%)
Strand = Plus / Minus
Query: 1 gataatacaacctgctaagtgctagaacacttagcaggttgtattatat 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gataatacaacctgctaagtgctagaacacttagcaggttgtattatat 22
Score = 60.0 bits (30), Expect = 1e-10
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtattat 47
|||||||||||||||||||| | | ||||||||||||||||||||
Sbjct: 24 ataatacaacctgctaagtgttctagcacttagcaggttgtattat 69
>27877_mml-mir-374b:mirbase
Length = 72
Score = 89.7 bits (45), Expect = 1e-19
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 1 gataatacaacctgctaagtgctagaacacttagcaggttgtattatat 49
||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 59 gataatacaacctgctaagtgctaggacacttagcaggttgtattatat 11
Score = 52.0 bits (26), Expect = 3e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtattat 47
|||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 13 ataatacaacctgctaagtgtcctagcacttagcaggttgtattat 58
>28614_hsa-mir-374b:mirbase
Length = 72
Score = 89.7 bits (45), Expect = 1e-19
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 1 gataatacaacctgctaagtgctagaacacttagcaggttgtattatat 49
||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 59 gataatacaacctgctaagtgctaggacacttagcaggttgtattatat 11
Score = 52.0 bits (26), Expect = 3e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtattat 47
|||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 13 ataatacaacctgctaagtgtcctagcacttagcaggttgtattat 58
>28615_hsa-mir-374c:mirbase
Length = 70
Score = 89.7 bits (45), Expect = 1e-19
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 1 gataatacaacctgctaagtgctagaacacttagcaggttgtattatat 49
||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 12 gataatacaacctgctaagtgctaggacacttagcaggttgtattatat 60
Score = 52.0 bits (26), Expect = 3e-08
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtattat 47
|||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 58 ataatacaacctgctaagtgtcctagcacttagcaggttgtattat 13
>30351_ptr-mir-374b:mirbase
Length = 71
Score = 89.7 bits (45), Expect = 1e-19
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 1 gataatacaacctgctaagtgctagaacacttagcaggttgtattatat 49
||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 59 gataatacaacctgctaagtgctaggacacttagcaggttgtattatat 11
Score = 52.0 bits (26), Expect = 3e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtattat 47
|||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 13 ataatacaacctgctaagtgtcctagcacttagcaggttgtattat 58
>32887_rno-mir-374:mirbase
Length = 68
Score = 87.7 bits (44), Expect = 6e-19
Identities = 47/48 (97%)
Strand = Plus / Minus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtattatat 49
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 57 ataatacaacgtgctaagtgctagaacacttagcaggttgtattatat 10
Score = 52.0 bits (26), Expect = 3e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtattat 47
|||||||||||||||||||| | | ||||||||| ||||||||||
Sbjct: 12 ataatacaacctgctaagtgttctagcacttagcacgttgtattat 57
>26821_cfa-mir-374b:mirbase
Length = 52
Score = 81.8 bits (41), Expect = 4e-17
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 1 gataatacaacctgctaagtgctagaacacttagcaggttgtattatat 49
|||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 49 gataatacaacctgataagtgctaggacacttagcaggttgtattatat 1
Score = 44.1 bits (22), Expect = 8e-06
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtattat 47
|||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 3 ataatacaacctgctaagtgtcctagcacttatcaggttgtattat 48
>27155_eca-mir-374b:mirbase
Length = 72
Score = 81.8 bits (41), Expect = 4e-17
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 1 gataatacaacctgctaagtgctagaacacttagcaggttgtattatat 49
|||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 59 gataatacaacctgataagtgctaggacacttagcaggttgtattatat 11
Score = 44.1 bits (22), Expect = 8e-06
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtattat 47
|||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 13 ataatacaacctgctaagtgtcctagcacttatcaggttgtattat 58
>33346_bta-mir-374b:mirbase
Length = 95
Score = 81.8 bits (41), Expect = 4e-17
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 1 gataatacaacctgctaagtgctagaacacttagcaggttgtattatat 49
|||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 70 gataatacaacctgataagtgctaggacacttagcaggttgtattatat 22
Score = 44.1 bits (22), Expect = 8e-06
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtattat 47
|||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 24 ataatacaacctgctaagtgtcctagcacttatcaggttgtattat 69
>34077_ssc-mir-374b:mirbase
Length = 80
Score = 81.8 bits (41), Expect = 4e-17
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 1 gataatacaacctgctaagtgctagaacacttagcaggttgtattatat 49
|||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 57 gataatacaacctgataagtgctaggacacttagcaggttgtattatat 9
Score = 44.1 bits (22), Expect = 8e-06
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtattat 47
|||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 11 ataatacaacctgctaagtgtcctagcacttatcaggttgtattat 56
>34078_ssc-mir-374b:mirbase
Length = 80
Score = 81.8 bits (41), Expect = 4e-17
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 1 gataatacaacctgctaagtgctagaacacttagcaggttgtattatat 49
|||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 57 gataatacaacctgataagtgctaggacacttagcaggttgtattatat 9
Score = 44.1 bits (22), Expect = 8e-06
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtattat 47
|||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 11 ataatacaacctgctaagtgtcctagcacttatcaggttgtattat 56
>26820_cfa-mir-374a:mirbase
Length = 52
Score = 65.9 bits (33), Expect = 2e-12
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 4 aatacaacctgctaagtgctagaacacttagcaggttgtattata 48
||||||||||| ||||||||| |||||||| ||||||||||||||
Sbjct: 46 aatacaacctggtaagtgctacaacacttatcaggttgtattata 2
Score = 40.1 bits (20), Expect = 1e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtatt 45
||||||||||||| |||||| | | |||||| |||||||||||
Sbjct: 3 ataatacaacctgataagtgttgtagcacttaccaggttgtatt 46
>27154_eca-mir-374a:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 5e-10
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 4 aatacaacctgctaagtgctagaacacttagcaggttgtattata 48
||||||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 57 aatacaacctgataagtgctgtaacacttatcaggttgtattata 13
Score = 48.1 bits (24), Expect = 5e-07
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtatt 45
||||||||||||| |||||| || | |||||| |||||||||||
Sbjct: 14 ataatacaacctgataagtgttacagcacttatcaggttgtatt 57
>28613_hsa-mir-374a:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 5e-10
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 4 aatacaacctgctaagtgctagaacacttagcaggttgtattata 48
||||||| ||| ||||||||| |||||||| ||||||||||||||
Sbjct: 57 aatacaatctgataagtgctataacacttatcaggttgtattata 13
Score = 40.1 bits (20), Expect = 1e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtatt 45
||||||||||||| |||||| || | |||||| ||| |||||||
Sbjct: 14 ataatacaacctgataagtgttatagcacttatcagattgtatt 57
>30350_ptr-mir-374a:mirbase
Length = 71
Score = 58.0 bits (29), Expect = 5e-10
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 4 aatacaacctgctaagtgctagaacacttagcaggttgtattata 48
||||||| ||| ||||||||| |||||||| ||||||||||||||
Sbjct: 57 aatacaatctgataagtgctataacacttatcaggttgtattata 13
Score = 40.1 bits (20), Expect = 1e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtatt 45
||||||||||||| |||||| || | |||||| ||| |||||||
Sbjct: 14 ataatacaacctgataagtgttatagcacttatcagattgtatt 57
>30978_ppy-mir-374a:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 5e-10
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 4 aatacaacctgctaagtgctagaacacttagcaggttgtattata 48
||||||| ||| ||||||||| |||||||| ||||||||||||||
Sbjct: 57 aatacaatctgataagtgctacaacacttatcaggttgtattata 13
>33345_bta-mir-374a:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 5e-10
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 4 aatacaacctgctaagtgctagaacacttagcaggttgtattata 48
||||||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 57 aatacaacctgataagtgctgtaacacttatcaggttgtattata 13
Score = 48.1 bits (24), Expect = 5e-07
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtatt 45
||||||||||||| |||||| || | |||||| |||||||||||
Sbjct: 14 ataatacaacctgataagtgttacagcacttatcaggttgtatt 57
>34076_ssc-mir-374a:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 5e-10
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 4 aatacaacctgctaagtgctagaacacttagcaggttgtattata 48
||||||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 55 aatacaacctgataagtgctgtaacacttatcaggttgtattata 11
Score = 48.1 bits (24), Expect = 5e-07
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtatt 45
||||||||||||| |||||| || | |||||| |||||||||||
Sbjct: 12 ataatacaacctgataagtgttacagcacttatcaggttgtatt 55
>27876_mml-mir-374a:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 1e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 4 aatacaacctgctaagtgctagaacacttagcaggttgtattata 48
||||||| ||| |||||||| |||||||| ||||||||||||||
Sbjct: 57 aatacaatctgataagtgctgtaacacttatcaggttgtattata 13
Score = 40.1 bits (20), Expect = 1e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 2 ataatacaacctgctaagtgctagaacacttagcaggttgtatt 45
||||||||||||| |||||| || | |||||| ||| |||||||
Sbjct: 14 ataatacaacctgataagtgttacagcacttatcagattgtatt 57
